MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 4076 to 4100 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 2888475 2888487 ACAGGT 12 - 2 ACCTGT PGSIP5 2888427 2890965 + Exon 48
NC_003070.9 2888728 2888742 AG 14 + 7 AG PGSIP5 2888427 2890965 + Exon 301
NC_003070.9 2888760 2888772 AAAAGC 12 + 2 CAAAAG PGSIP5 2888427 2890965 + Exon 333
NC_003070.9 2889542 2889561 AAAT 19 - 4 ATTT PGSIP5 2888427 2890965 + Intron 1115
NC_003070.9 2890209 2890222 AAAAT 13 - 2 TATTT PGSIP5 2888427 2890965 + Intron 1782
NC_003070.9 2890792 2890804 A 12 - 12 T PGSIP5 2888427 2890965 + Exon 2365
NC_003070.9 2891269 2891281 AGG 12 - 4 CCT NP1 2891019 2895182 + Exon 250
NC_003070.9 2895431 2895443 ACAGAG 12 - 2 TCTCTG AT1G09010 2895166 2899446 - Genic 4003
NC_003070.9 2896114 2896128 AG 14 + 7 AG AT1G09010 2895166 2899446 - Genic 3318
NC_003070.9 2897336 2897352 AACATG 16 - 2 TCATGT AT1G09010 2895166 2899446 - Genic 2094
NC_003070.9 2897527 2897542 AAACTG 15 + 2 AAACTG AT1G09010 2895166 2899446 - Genic 1904
NC_003070.9 2898733 2898745 AG 12 + 6 AG AT1G09010 2895166 2899446 - Genic 701
NC_003070.9 2898742 2898755 ACCCTC 13 - 2 GAGGGT AT1G09010 2895166 2899446 - Genic 691
NC_003070.9 2899367 2899379 AAAACG 12 + 2 AAAACG AT1G09010 2895166 2899446 - Genic 67
NC_003070.9 2899720 2899732 AATTAC 12 - 2 ATTGTA SNF4 2899776 2904862 - Intergenic 5130
NC_003070.9 2900052 2900073 A 21 + 21 A SNF4 2899776 2904862 - Exon 4789
NC_003070.9 2900262 2900275 AAACCC 13 + 2 CAAACC SNF4 2899776 2904862 - Intron 4587
NC_003070.9 2900912 2900925 AATG 13 - 3 TCAT SNF4 2899776 2904862 - Intron 3937
NC_003070.9 2902817 2902832 AAAAAG 15 + 2 AAAAAG SNF4 2899776 2904862 - Intron 2030
NC_003070.9 2903259 2903271 ACATCC 12 + 2 CATCCA SNF4 2899776 2904862 - Exon 1591
NC_003070.9 2904875 2904889 A 14 - 14 T SNF4 2899776 2904862 - Intergenic -13
NC_003070.9 2904929 2904945 A 16 + 16 A SNF4 2899776 2904862 - Intergenic -67
NC_003070.9 2905297 2905309 AAAT 12 + 3 TAAA SNF4 2899776 2904862 - Intergenic -435
NC_003070.9 2906061 2906073 A 12 - 12 T SNF4 2899776 2904862 - Intergenic -1199
NC_003070.9 2906350 2906364 AAAG 14 - 3 TTCT SNF4 2899776 2904862 - Intergenic -1488