MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 5001 to 5025 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 3579976 3579988 AATACC 12 - 2 TGGTAT SEX1 3580830 3590928 - Intergenic 10940
NC_003070.9 3581109 3581121 AAGCAT 12 - 2 TATGCT SEX1 3580830 3590928 - Exon 9807
NC_003070.9 3581527 3581539 ACCTGC 12 + 2 CCTGCA SEX1 3580830 3590928 - Exon 9389
NC_003070.9 3583898 3583911 AGAGG 13 - 2 CTCCT SEX1 3580830 3590928 - Exon 7017
NC_003070.9 3584031 3584044 AAAGAG 13 + 2 AAGAGA SEX1 3580830 3590928 - Intron 6884
NC_003070.9 3585874 3585886 AAAGTC 12 + 2 AAGTCA SEX1 3580830 3590928 - Exon 5042
NC_003070.9 3585933 3585945 AAGATT 12 + 2 AAGATT SEX1 3580830 3590928 - Intron 4983
NC_003070.9 3587620 3587634 ACCAG 14 + 2 AGACC SEX1 3580830 3590928 - Intron 3294
NC_003070.9 3590219 3590232 AAAAAT 13 - 2 TTATTT SEX1 3580830 3590928 - Intron 696
NC_003070.9 3590223 3590237 AAAAT 14 - 2 TTTTA SEX1 3580830 3590928 - Intron 691
NC_003070.9 3590545 3590557 ACTC 12 + 3 TCAC SEX1 3580830 3590928 - Exon 371
NC_003070.9 3590878 3590893 A 15 - 15 T SEX1 3580830 3590928 - Exon 35
NC_003070.9 3591480 3591492 AAAAC 12 + 2 AACAA AT1G10770 3591633 3592580 - Intergenic 1088
NC_003070.9 3591509 3591521 AAACAC 12 - 2 GTTTGT AT1G10770 3591633 3592580 - Intergenic 1059
NC_003070.9 3591516 3591528 AAAGAC 12 - 2 TTTGTC AT1G10770 3591633 3592580 - Intergenic 1052
NC_003070.9 3591745 3591758 AAAAAC 13 + 2 AAAACA AT1G10770 3591633 3592580 - Genic 822
NC_003070.9 3595127 3595139 AG 12 + 6 AG AT1G10780 3592680 3595220 - Genic 81
NC_003070.9 3595237 3595249 AAAAAT 12 - 2 TTTTTA AT1G10780 3592680 3595220 - Intergenic -17
NC_003070.9 3595390 3595407 AAAAAT 17 + 2 TAAAAA AT1G10780 3592680 3595220 - Intergenic -170
NC_003070.9 3595775 3595787 AAAAT 12 + 2 ATAAA AT1G10790 3596264 3597847 + Intergenic -477
NC_003070.9 3596084 3596097 AT 13 + 6 TA AT1G10790 3596264 3597847 + Intergenic -167
NC_003070.9 3596382 3596394 AGAGCG 12 - 2 CGCTCT AT1G10790 3596264 3597847 + Genic 118
NC_003070.9 3597788 3597800 AATCAG 12 - 2 CTGATT AT1G10790 3596264 3597847 + Genic 1524
NC_003070.9 3598570 3598585 AAACCG 15 - 2 TTTCGG AT1G10800 3598069 3598885 - Genic 300
NC_003070.9 3603400 3603412 AAAAGT 12 + 2 GTAAAA AT1G10820 3600910 3605076 - Genic 1664