MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 5051 to 5075 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 3621465 3621477 ACATCT 12 + 2 ACATCT AGD4 3616610 3623806 - Intron 2329
NC_003070.9 3622266 3622294 A 28 + 28 A AGD4 3616610 3623806 - Intron 1512
NC_003070.9 3623873 3623889 AAAT 16 + 4 TAAA AGD4 3616610 3623806 - Intergenic -67
NC_003070.9 3623931 3623943 AAAAAC 12 + 2 CAAAAA AT1G10875 3623998 3625422 - Intergenic 1479
NC_003070.9 3624465 3624478 AATCAC 13 - 2 GATTGT AT1G10875 3623998 3625422 - Genic 944
NC_003070.9 3625855 3625867 AACCG 12 + 2 CGAAC AT1G10880 3625623 3627082 - Genic 1215
NC_003070.9 3626760 3626777 AAGGAG 17 + 2 AGGAGA AT1G10880 3625623 3627082 - Genic 305
NC_003070.9 3627777 3627792 AAC 15 + 5 AAC AT1G10890 3627646 3630808 + Genic 131
NC_003070.9 3628020 3628034 AGCTC 14 - 2 AGCTG AT1G10890 3627646 3630808 + Genic 374
NC_003070.9 3630896 3630909 AAACT 13 - 2 GTTTA AT1G10890 3627646 3630808 + Intergenic 3250
NC_003070.9 3631748 3631760 AGCGCC 12 + 2 GCCAGC AT1G10900 3632132 3637250 - Intergenic 5490
NC_003070.9 3637175 3637187 AAAG 12 - 3 CTTT AT1G10900 3632132 3637250 - Genic 63
NC_003070.9 3637180 3637193 AAAAG 13 - 2 TTTCT AT1G10900 3632132 3637250 - Genic 57
NC_003070.9 3637293 3637305 AAAAG 12 + 2 AAGAA AT1G10900 3632132 3637250 - Intergenic -43
NC_003070.9 3638423 3638435 AATCTG 12 - 2 TCAGAT AT1G10900 3632132 3637250 - Intergenic -1173
NC_003070.9 3638672 3638684 AAGCAG 12 - 2 TGCTTC EMB3103 3639835 3644187 + Intergenic -1151
NC_003070.9 3639075 3639089 A 14 - 14 T EMB3103 3639835 3644187 + Intergenic -746
NC_003070.9 3642456 3642468 AAAGGG 12 + 2 GAAAGG EMB3103 3639835 3644187 + Exon 2621
NC_003070.9 3647209 3647221 AAAGTG 12 - 2 CTTTCA LOV1 3644180 3647784 - Exon 563
NC_003070.9 3647229 3647241 ATCGGC 12 + 2 GGCATC LOV1 3644180 3647784 - Exon 543
NC_003070.9 3647421 3647433 ACTGAG 12 + 2 TGAGAC LOV1 3644180 3647784 - Exon 351
NC_003070.9 3647523 3647536 AATAT 13 - 2 TATTA LOV1 3644180 3647784 - Exon 248
NC_003070.9 3647881 3647893 A 12 + 12 A RECQ4A 3647876 3655685 - Exon 7792
NC_003070.9 3648086 3648099 AAAATC 13 + 2 AAATCA RECQ4A 3647876 3655685 - Exon 7586
NC_003070.9 3652140 3652152 AAAAAC 12 + 2 AAAACA RECQ4A 3647876 3655685 - Exon 3533