MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 5076 to 5100 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 3652754 3652766 AAACTC 12 + 2 ACTCAA RECQ4A 3647876 3655685 - Intron 2919
NC_003070.9 3654110 3654122 AAAGAG 12 + 2 GAAAGA RECQ4A 3647876 3655685 - Intron 1563
NC_003070.9 3654611 3654623 AAGTAG 12 - 2 TTCTAC RECQ4A 3647876 3655685 - Intron 1062
NC_003070.9 3655752 3655766 AAAAAT 14 + 2 AAAAAT SNRK2.4 3655673 3658612 - Exon 2846
NC_003070.9 3657589 3657602 AATGGC 13 + 2 ATGGCA SNRK2.4 3655673 3658612 - Exon 1010
NC_003070.9 3658308 3658322 A 14 + 14 A SNRK2.4 3655673 3658612 - Exon 290
NC_003070.9 3658463 3658478 AAAAAG 15 - 2 TTTCTT SNRK2.4 3655673 3658612 - Exon 134
NC_003070.9 3659435 3659449 AAAAG 14 - 2 TTTTC TMN1 3659204 3664264 + Intron 231
NC_003070.9 3663747 3663766 A 19 - 19 T TMN1 3659204 3664264 + Exon 4543
NC_003070.9 3663823 3663835 ACT 12 + 4 TAC TMN1 3659204 3664264 + Exon 4619
NC_003070.9 3663872 3663886 AAGTG 14 - 2 ACTTC TMN1 3659204 3664264 + Exon 4668
NC_003070.9 3665788 3665800 AC 12 + 6 AC ZIP4 3665087 3667139 - Intron 1339
NC_003070.9 3666211 3666223 AAAGGG 12 + 2 GGGAAA ZIP4 3665087 3667139 - Exon 916
NC_003070.9 3666650 3666663 AAATG 13 - 2 TCATT ZIP4 3665087 3667139 - Intron 476
NC_003070.9 3666948 3666960 AAG 12 - 4 TTC ZIP4 3665087 3667139 - Exon 179
NC_003070.9 3669421 3669433 ACATAT 12 + 2 CATATA AT1G10980 3667224 3669935 - Genic 502
NC_003070.9 3669963 3669975 ACACGT 12 + 2 CGTACA AT1G10980 3667224 3669935 - Intergenic -28
NC_003070.9 3670305 3670318 AT 13 + 6 AT AT1G10990 3670243 3671191 - Genic 873
NC_003070.9 3670387 3670403 AAG 16 - 5 TCT AT1G10990 3670243 3671191 - Genic 788
NC_003070.9 3672028 3672049 AATCTC 21 + 3 TCAATC MLO4 3671756 3676133 - Exon 4084
NC_003070.9 3675304 3675316 AAAG 12 + 3 AAAG MLO4 3671756 3676133 - Intron 817
NC_003070.9 3675671 3675685 A 14 + 14 A MLO4 3671756 3676133 - Intron 448
NC_003070.9 3675768 3675780 AAAAAC 12 + 2 AAAACA MLO4 3671756 3676133 - Intron 353
NC_003070.9 3677436 3677448 AG 12 - 6 TC AT1G11020 3676691 3678567 + Genic 745
NC_003070.9 3678438 3678450 AAAAG 12 - 2 TTTCT AT1G11020 3676691 3678567 + Genic 1747