MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 5026 to 5050 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 3603638 3603651 AAAGAT 13 - 2 CTTTAT AT1G10820 3600910 3605076 - Genic 1425
NC_003070.9 3604155 3604168 ACTGGG 13 - 2 GTCCCA AT1G10820 3600910 3605076 - Genic 908
NC_003070.9 3604311 3604323 AACAAT 12 - 2 TATTGT AT1G10820 3600910 3605076 - Genic 753
NC_003070.9 3604918 3604930 ACATC 12 - 2 GATGT AT1G10820 3600910 3605076 - Genic 146
NC_003070.9 3604985 3605003 AG 18 + 9 GA AT1G10820 3600910 3605076 - Genic 73
NC_003070.9 3605095 3605108 AAAAG 13 - 2 TTTCT AT1G10820 3600910 3605076 - Intergenic -19
NC_003070.9 3605114 3605139 A 25 - 25 T AT1G10820 3600910 3605076 - Intergenic -38
NC_003070.9 3605675 3605688 AAAC 13 + 3 AAAC Z-ISO 3605512 3607580 - Exon 1892
NC_003070.9 3607754 3607766 AAATT 12 + 2 TAAAT TIF3H1 3607631 3610616 - Exon 2850
NC_003070.9 3607784 3607797 AAAAAC 13 + 2 AAAAAC TIF3H1 3607631 3610616 - Exon 2819
NC_003070.9 3607855 3607867 AAAAAC 12 + 2 AAAAAC TIF3H1 3607631 3610616 - Exon 2749
NC_003070.9 3608421 3608433 AACTGG 12 + 2 ACTGGA TIF3H1 3607631 3610616 - Exon 2183
NC_003070.9 3610663 3610675 AAATT 12 - 2 ATTTA TIF3H1 3607631 3610616 - Intergenic -47
NC_003070.9 3611690 3611702 AAAGAG 12 - 2 TTTCTC AT1G10850 3611490 3614613 + Genic 200
NC_003070.9 3611876 3611888 AG 12 + 6 GA AT1G04823 3611490 3612255 - Genic 367
NC_003070.9 3611989 3612007 AAG 18 - 6 TTC AT1G04823 3611490 3612255 - Genic 248
NC_003070.9 3612231 3612250 AAG 19 - 6 CTT AT1G04823 3611490 3612255 - Genic 5
NC_003070.9 3612245 3612257 AAGACG 12 - 2 TCTTCG AT1G04823 3611490 3612255 - Genic -2
NC_003070.9 3613152 3613164 ACAGAG 12 + 2 CAGAGA AT1G10850 3611490 3614613 + Genic 1662
NC_003070.9 3614625 3614637 ACTAT 12 - 2 AGTAT AT1G10865 3614513 3616308 - Genic 1671
NC_003070.9 3614650 3614663 AATGTC 13 - 2 TTGACA AT1G10865 3614513 3616308 - Genic 1645
NC_003070.9 3614748 3614760 AAAATG 12 + 2 AAAATG AT1G10865 3614513 3616308 - Genic 1548
NC_003070.9 3616548 3616560 A 12 + 12 A AGD4 3616610 3623806 - Intergenic 7246
NC_003070.9 3616596 3616609 A 13 - 13 T AGD4 3616610 3623806 - Intergenic 7197
NC_003070.9 3619454 3619466 AAATAT 12 + 2 TATAAA AGD4 3616610 3623806 - Intron 4340