MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 5801 to 5825 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 4138363 4138375 AATATC 12 + 2 CAATAT FMO 4137511 4140158 + Intron 852
NC_003070.9 4138399 4138412 A 13 - 13 T FMO 4137511 4140158 + Intron 888
NC_003070.9 4139290 4139311 A 21 + 21 A FMO 4137511 4140158 + Exon 1779
NC_003070.9 4139538 4139551 AATGT 13 - 2 ACATT FMO 4137511 4140158 + Intron 2027
NC_003070.9 4139565 4139578 A 13 + 13 A FMO 4137511 4140158 + Intron 2054
NC_003070.9 4139880 4139903 AT 23 + 11 TA FMO 4137511 4140158 + Exon 2369
NC_003070.9 4140198 4140213 AAT 15 - 5 TAT RFL1 4140216 4143916 + Intergenic -3
NC_003070.9 4140517 4140534 AAACAC 17 - 2 TGTTTG RFL1 4140216 4143916 + Intron 301
NC_003070.9 4140642 4140654 AGATAT 12 - 2 CTATAT RFL1 4140216 4143916 + Intron 426
NC_003070.9 4140959 4140971 ACCGAG 12 - 2 GTCTCG RFL1 4140216 4143916 + Exon 743
NC_003070.9 4141670 4141682 AAAAAC 12 + 2 AAAAAC RFL1 4140216 4143916 + Exon 1454
NC_003070.9 4144147 4144160 AT 13 + 6 TA AT1G12211 4140875 4144114 - Intergenic -33
NC_003070.9 4144520 4144533 AAAATC 13 - 2 TTGATT RPS5 4144257 4147939 + Exon 263
NC_003070.9 4144968 4144980 AG 12 - 6 TC RPS5 4144257 4147939 + Exon 711
NC_003070.9 4149598 4149610 ACATC 12 - 2 TGTGA AT1G12230 4147962 4151056 + Genic 1636
NC_003070.9 4151046 4151059 AAACT 13 + 2 AAACT AT1G12230 4147962 4151056 + Genic 3084
NC_003070.9 4153414 4153427 AAATAC 13 + 2 ACAAAT ATBETAFRUCT4 4153641 4157653 + Intergenic -214
NC_003070.9 4154371 4154383 AAAAC 12 - 2 TTTGT ATBETAFRUCT4 4153641 4157653 + Intron 730
NC_003070.9 4154569 4154582 AACAC 13 + 2 ACAAC ATBETAFRUCT4 4153641 4157653 + Intron 928
NC_003070.9 4158297 4158314 ACACTC 17 + 2 CACACT AT1G12244 4157654 4159046 + Genic 643
NC_003070.9 4158523 4158535 AGAT 12 - 3 TATC AT1G12244 4157654 4159046 + Genic 869
NC_003070.9 4159032 4159044 AAAAC 12 - 2 TTTGT AT1G12244 4157654 4159046 + Genic 1378
NC_003070.9 4159078 4159090 AAAGTC 12 + 2 CAAAGT AT1G12244 4157654 4159046 + Intergenic 1424
NC_003070.9 4159104 4159116 AATTCC 12 - 2 TTGGAA AT1G12244 4157654 4159046 + Intergenic 1450
NC_003070.9 4160682 4160694 AAGATT 12 - 2 CTTAAT AT1G12250 4159227 4161506 + Genic 1455