MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 5851 to 5875 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 4172779 4172793 AACCGG 14 + 2 GAACCG Hop1 4172035 4174730 + Exon 744
NC_003070.9 4172801 4172815 AAGGAG 14 + 2 AGGAGA Hop1 4172035 4174730 + Exon 766
NC_003070.9 4173431 4173444 A 13 - 13 T Hop1 4172035 4174730 + Intron 1396
NC_003070.9 4173443 4173469 AC 26 - 13 TG Hop1 4172035 4174730 + Intron 1408
NC_003070.9 4174303 4174315 ACTCAT 12 - 2 GTATGA Hop1 4172035 4174730 + Intron 2268
NC_003070.9 4175179 4175191 ACTATG 12 - 2 TCATAG SUMM2 4174875 4178021 - Exon 2830
NC_003070.9 4175356 4175369 AATGAT 13 + 2 ATGATA SUMM2 4174875 4178021 - Exon 2652
NC_003070.9 4176232 4176244 AAAATG 12 - 2 TTTCAT SUMM2 4174875 4178021 - Exon 1777
NC_003070.9 4177697 4177709 AATAG 12 + 2 ATAGA SUMM2 4174875 4178021 - Intron 312
NC_003070.9 4178414 4178426 AAATAC 12 + 2 ATACAA AT1G12290 4177917 4182593 - Genic 4167
NC_003070.9 4178502 4178514 AAAGG 12 + 2 AAAGG AT1G12290 4177917 4182593 - Genic 4079
NC_003070.9 4181522 4181534 AAATG 12 - 2 TTCAT AT1G12290 4177917 4182593 - Genic 1059
NC_003070.9 4182283 4182297 ACAT 14 + 3 CATA MIR472 4182132 4182299 - Exon 2
NC_003070.9 4182648 4182662 A 14 + 14 A AT1G12290 4177917 4182593 - Intergenic -55
NC_003070.9 4182715 4182727 AGCTC 12 + 2 AGCTC AT1G12290 4177917 4182593 - Intergenic -122
NC_003070.9 4182886 4182898 AAACGC 12 - 2 TTTGCG AT1G12300 4183010 4186247 - Intergenic 3349
NC_003070.9 4185203 4185215 AAATGG 12 - 2 CATTTC AT1G12300 4183010 4186247 - Genic 1032
NC_003070.9 4186101 4186118 ACTCTC 17 + 2 ACTCTC AT1G12300 4183010 4186247 - Genic 129
NC_003070.9 4186536 4186548 AAAAG 12 - 2 TCTTT AT1G12320 4186624 4190342 + Intergenic -76
NC_003070.9 4187298 4187311 AAGAT 13 + 2 AGATA AT1G12320 4186624 4190342 + Genic 674
NC_003070.9 4189003 4189015 AAAG 12 + 3 AGAA AT1G12320 4186624 4190342 + Genic 2379
NC_003070.9 4189396 4189408 AAG 12 + 4 AAG AT1G12320 4186624 4190342 + Genic 2772
NC_003070.9 4189409 4189422 AAG 13 + 4 AGA AT1G12320 4186624 4190342 + Genic 2785
NC_003070.9 4189608 4189622 AAAAG 14 - 2 TTTTC AT1G12320 4186624 4190342 + Genic 2984
NC_003070.9 4191045 4191057 ATATCG 12 + 2 TCGATA AT1G04943 4191063 4191268 - Intergenic 211