Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3576 to 3600 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2357723
2357736
AGCCTG
13
-
2
GCTCAG
UKMR15_RS10210
2357716
2358783
+
Genic
-7
NZ_LR595896.1
2357750
2357762
CCCG
12
+
3
CCGC
UKMR15_RS10210
2357716
2358783
+
Genic
-34
NZ_LR595896.1
2357765
2357777
CCG
12
+
4
CGC
UKMR15_RS10210
2357716
2358783
+
Genic
-49
NZ_LR595896.1
2357817
2357829
ACGCTC
12
+
2
ACGCTC
UKMR15_RS10210
2357716
2358783
+
Genic
-101
NZ_LR595896.1
2358359
2358371
ACGGC
12
+
2
GCACG
UKMR15_RS10210
2357716
2358783
+
Genic
-643
NZ_LR595896.1
2358544
2358556
AAGCCG
12
-
2
GCTTCG
UKMR15_RS10210
2357716
2358783
+
Genic
-828
NZ_LR595896.1
2358802
2358814
ACCATG
12
+
2
GACCAT
UKMR15_RS10215
2358807
2360000
+
Genic
5
NZ_LR595896.1
2358925
2358937
AGC
12
-
4
GCT
UKMR15_RS10215
2358807
2360000
+
Genic
-118
NZ_LR595896.1
2359363
2359375
AGCGCG
12
-
2
CGCGCT
UKMR15_RS10215
2358807
2360000
+
Genic
-556
NZ_LR595896.1
2359377
2359389
CCGCG
12
+
2
GCGCC
UKMR15_RS10215
2358807
2360000
+
Genic
-570
NZ_LR595896.1
2359587
2359599
ATCGCG
12
+
2
TCGCGA
UKMR15_RS10215
2358807
2360000
+
Genic
-780
NZ_LR595896.1
2359649
2359662
CCGCG
13
-
2
GCGGC
UKMR15_RS10215
2358807
2360000
+
Genic
-842
NZ_LR595896.1
2360403
2360415
AGCGCG
12
-
2
GCTCGC
UKMR15_RS10220
2360057
2361166
+
Genic
-346
NZ_LR595896.1
2360531
2360543
ATCGCG
12
+
2
CGATCG
UKMR15_RS10220
2360057
2361166
+
Genic
-474
NZ_LR595896.1
2360603
2360615
AACGGC
12
+
2
ACGGCA
UKMR15_RS10220
2360057
2361166
+
Genic
-546
NZ_LR595896.1
2360710
2360724
CCCGCG
14
-
2
GGCGCG
UKMR15_RS10220
2360057
2361166
+
Genic
-653
NZ_LR595896.1
2360734
2360746
AACGTC
12
+
2
AACGTC
UKMR15_RS10220
2360057
2361166
+
Genic
-677
NZ_LR595896.1
2361416
2361428
CCCG
12
+
3
CGCC
UKMR15_RS10220
2360057
2361166
+
Intergenic
-1359
NZ_LR595896.1
2361857
2361869
CCGCGG
12
+
2
GCCGCG
UKMR15_RS10230
2362110
2362292
-
Intergenic
241
NZ_LR595896.1
2362976
2362989
AAATG
13
-
2
CATTT
UKMR15_RS10235
2363230
2363691
+
Intergenic
241
NZ_LR595896.1
2363224
2363236
AAAATG
12
+
2
TGAAAA
UKMR15_RS10235
2363230
2363691
+
Genic
-6
NZ_LR595896.1
2363929
2363941
ATCGCG
12
+
2
TCGCGA
UKMR15_RS10240
2363767
2364000
+
Genic
-162
NZ_LR595896.1
2367726
2367738
ATCGCG
12
+
2
TCGCGA
UKMR15_RS10270
2367072
2367797
+
Genic
-654
NZ_LR595896.1
2368640
2368654
AGCGCG
14
+
2
AGCGCG
UKMR15_RS10285
2368496
2368582
-
Intergenic
-144
NZ_LR595896.1
2369217
2369229
AGCGCC
12
+
2
AGCGCC
hpnD
2368813
2369655
+
Genic
-404