Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3601 to 3625 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2369224
2369238
CCGGCG
14
+
2
GCGCCG
hpnD
2368813
2369655
+
Genic
-411
NZ_LR595896.1
2369531
2369547
AGCGCG
16
-
2
CGCGCT
hpnD
2368813
2369655
+
Genic
-718
NZ_LR595896.1
2369815
2369829
AACGGC
14
-
2
GTTGCC
UKMR15_RS10295
2369696
2370952
-
Genic
-119
NZ_LR595896.1
2370129
2370141
CCGGCG
12
+
2
CCGGCG
UKMR15_RS10295
2369696
2370952
-
Genic
-433
NZ_LR595896.1
2371010
2371023
ACGATG
13
-
2
TCATCG
UKMR15_RS10300
2371035
2372450
-
Intergenic
12
NZ_LR595896.1
2371226
2371240
CCGCG
14
+
2
CGCGC
UKMR15_RS10300
2371035
2372450
-
Genic
-191
NZ_LR595896.1
2372833
2372848
CCGCG
15
+
3
CGCCG
UKMR15_RS10305
2372683
2372973
-
Genic
-150
NZ_LR595896.1
2373399
2373411
ACGAGC
12
-
2
TGCTCG
ompR
2373243
2373968
+
Genic
-156
NZ_LR595896.1
2374236
2374248
ATCCCG
12
+
2
CCGATC
UKMR15_RS10320
2374035
2375393
+
Genic
-201
NZ_LR595896.1
2374450
2374463
ACG
13
+
4
CGA
UKMR15_RS10320
2374035
2375393
+
Genic
-415
NZ_LR595896.1
2374533
2374546
AGCGCG
13
-
2
TCGCGC
UKMR15_RS10320
2374035
2375393
+
Genic
-498
NZ_LR595896.1
2374600
2374612
AGCGCG
12
-
2
GCTCGC
UKMR15_RS10320
2374035
2375393
+
Genic
-565
NZ_LR595896.1
2375308
2375320
AGCCGC
12
-
2
GCTGCG
UKMR15_RS10320
2374035
2375393
+
Genic
-1273
NZ_LR595896.1
2376887
2376899
ACGCG
12
+
2
CGACG
UKMR15_RS10330
2376218
2376745
+
Intergenic
-669
NZ_LR595896.1
2377206
2377218
AACGTG
12
-
2
TTCACG
UKMR15_RS10335
2377113
2377601
-
Genic
-93
NZ_LR595896.1
2378306
2378318
ACCGGC
12
-
2
TGCCGG
UKMR15_RS10340
2377642
2378352
-
Genic
-664
NZ_LR595896.1
2378686
2378700
ACGCGC
14
-
2
GCGCGT
mfd
2378373
2381942
+
Genic
-313
NZ_LR595896.1
2379806
2379818
ACCGAG
12
+
2
ACCGAG
mfd
2378373
2381942
+
Genic
-1433
NZ_LR595896.1
2380138
2380152
CCGCG
14
+
2
GCGCC
mfd
2378373
2381942
+
Genic
-1765
NZ_LR595896.1
2380263
2380275
AAGCCG
12
-
2
GCTTCG
mfd
2378373
2381942
+
Genic
-1890
NZ_LR595896.1
2380641
2380653
AGGCCG
12
-
2
GCCTCG
mfd
2378373
2381942
+
Genic
-2268
NZ_LR595896.1
2382602
2382617
ACACGC
15
-
2
GTGTGC
argE
2383135
2384352
+
Intergenic
518
NZ_LR595896.1
2382770
2382782
CCGCGG
12
+
2
GCCGCG
argE
2383135
2384352
+
Intergenic
353
NZ_LR595896.1
2385651
2385663
AATCG
12
-
2
CGATT
UKMR15_RS10360
2385638
2385889
-
Genic
-13
NZ_LR595896.1
2385710
2385722
CCCGG
12
-
2
GCCGG
UKMR15_RS10360
2385638
2385889
-
Genic
-72