Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3626 to 3650 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2386996
2387008
AGCCG
12
+
2
GCCGA
UKMR15_RS10370
2386912
2389434
-
Genic
-84
NZ_LR595896.1
2387441
2387453
AGCGCG
12
-
2
TCGCGC
UKMR15_RS10370
2386912
2389434
-
Genic
-529
NZ_LR595896.1
2387636
2387648
AAGCCG
12
+
2
CGAAGC
UKMR15_RS10370
2386912
2389434
-
Genic
-724
NZ_LR595896.1
2387738
2387751
ATCGGC
13
+
2
GCATCG
UKMR15_RS10370
2386912
2389434
-
Genic
-826
NZ_LR595896.1
2387991
2388003
ACCGCG
12
+
2
CGCGAC
UKMR15_RS10370
2386912
2389434
-
Genic
-1079
NZ_LR595896.1
2388156
2388168
ACGGCG
12
-
2
CGTCGC
UKMR15_RS10370
2386912
2389434
-
Genic
-1244
NZ_LR595896.1
2388907
2388919
ACGATC
12
-
2
ATCGTG
UKMR15_RS10370
2386912
2389434
-
Genic
-1995
NZ_LR595896.1
2389308
2389321
CCGCG
13
-
2
GCGGC
UKMR15_RS10370
2386912
2389434
-
Genic
-2396
NZ_LR595896.1
2390089
2390101
AGATCG
12
+
2
GATCGA
UKMR15_RS10380
2389950
2390630
+
Genic
-139
NZ_LR595896.1
2390110
2390124
AACGC
14
+
2
CGCAA
UKMR15_RS10380
2389950
2390630
+
Genic
-160
NZ_LR595896.1
2390237
2390249
AGGCCG
12
+
2
GCCGAG
UKMR15_RS10380
2389950
2390630
+
Genic
-287
NZ_LR595896.1
2390655
2390673
CCG
18
-
6
GCG
UKMR15_RS10380
2389950
2390630
+
Intergenic
-705
NZ_LR595896.1
2391244
2391260
ACGATC
16
-
2
CGTGAT
UKMR15_RS10385
2390745
2391959
+
Genic
-499
NZ_LR595896.1
2391670
2391682
AGCCGC
12
+
2
GCCGCA
UKMR15_RS10385
2390745
2391959
+
Genic
-925
NZ_LR595896.1
2391710
2391722
CCG
12
-
4
GGC
UKMR15_RS10385
2390745
2391959
+
Genic
-965
NZ_LR595896.1
2392530
2392542
AGC
12
-
4
TGC
mscL
2392143
2392574
+
Genic
-387
NZ_LR595896.1
2393247
2393259
AAGCCG
12
-
2
CGGCTT
UKMR15_RS10395
2392940
2393383
+
Genic
-307
NZ_LR595896.1
2393274
2393286
CCCGCG
12
+
2
CCGCGC
UKMR15_RS10395
2392940
2393383
+
Genic
-334
NZ_LR595896.1
2393521
2393533
CCG
12
+
4
CGC
UKMR15_RS10400
2393564
2394502
-
Intergenic
31
NZ_LR595896.1
2393945
2393957
CCCGCG
12
+
2
CCCGCG
UKMR15_RS10400
2393564
2394502
-
Genic
-381
NZ_LR595896.1
2394441
2394453
ACGTCC
12
+
2
CCACGT
UKMR15_RS10400
2393564
2394502
-
Genic
-877
NZ_LR595896.1
2396272
2396285
AGATC
13
-
2
TCTGA
UKMR15_RS10410
2395544
2396473
+
Genic
-728
NZ_LR595896.1
2396531
2396559
ACGCCG
28
-
4
CGGCGT
UKMR15_RS10410
2395544
2396473
+
Intergenic
-987
NZ_LR595896.1
2396558
2396604
ACAGCG
46
+
7
CAGCGA
UKMR15_RS10410
2395544
2396473
+
Intergenic
-1014
NZ_LR595896.1
2398364
2398378
CCGCG
14
-
2
GCGCG
UKMR15_RS10415
2396719
2398107
-
Intergenic
-1645