Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3651 to 3675 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2398436
2398448
CCG
12
-
4
GCG
uraH
2398714
2399067
+
Intergenic
266
NZ_LR595896.1
2398493
2398506
CCGGCG
13
+
2
GGCGCC
uraH
2398714
2399067
+
Intergenic
208
NZ_LR595896.1
2399479
2399491
ACCGCG
12
-
2
GTCGCG
UKMR15_RS10425
2399117
2400319
+
Genic
-362
NZ_LR595896.1
2400391
2400403
CCGCG
12
-
2
GCGCG
UKMR15_RS10425
2399117
2400319
+
Intergenic
-1274
NZ_LR595896.1
2400551
2400564
AACCG
13
+
2
CCGAA
UKMR15_RS10425
2399117
2400319
+
Intergenic
-1434
NZ_LR595896.1
2400568
2400580
CCCGG
12
-
2
GGGCC
UKMR15_RS10425
2399117
2400319
+
Intergenic
-1451
NZ_LR595896.1
2400983
2400997
CCGG
14
+
3
CGGC
UKMR15_RS10430
2401184
2401696
-
Intergenic
187
NZ_LR595896.1
2401410
2401422
ACG
12
+
4
CGA
UKMR15_RS10430
2401184
2401696
-
Genic
-226
NZ_LR595896.1
2401982
2401994
AGCGCG
12
+
2
GCGCGA
alc
2401693
2402706
-
Genic
-289
NZ_LR595896.1
2402019
2402031
CCG
12
-
4
GCG
alc
2401693
2402706
-
Genic
-326
NZ_LR595896.1
2402709
2402721
AAGGAC
12
-
2
CTTGTC
alc
2401693
2402706
-
Intergenic
-1016
NZ_LR595896.1
2402832
2402845
CCGCG
13
+
2
CGCCG
uraD
2402935
2403456
-
Intergenic
90
NZ_LR595896.1
2403337
2403351
CCG
14
-
4
GCG
uraD
2402935
2403456
-
Genic
-402
NZ_LR595896.1
2407691
2407703
AGCGCG
12
+
2
GAGCGC
UKMR15_RS10460
2407167
2407862
-
Genic
-524
NZ_LR595896.1
2408634
2408646
ACG
12
-
4
TCG
ldcA
2408186
2409127
-
Genic
-448
NZ_LR595896.1
2408688
2408700
ACGCCG
12
-
2
TCGGCG
ldcA
2408186
2409127
-
Genic
-502
NZ_LR595896.1
2408903
2408916
AGCGGC
13
+
2
GGCAGC
ldcA
2408186
2409127
-
Genic
-717
NZ_LR595896.1
2410127
2410142
CCG
15
-
5
GCG
UKMR15_RS10475
2409776
2410177
-
Genic
-351
NZ_LR595896.1
2410698
2410710
ATCGC
12
+
2
CGCAT
UKMR15_RS10480
2410979
2411485
-
Intergenic
269
NZ_LR595896.1
2412093
2412107
AGCGCG
14
-
2
CGCTCG
UKMR15_RS10485
2411853
2413073
+
Genic
-240
NZ_LR595896.1
2412224
2412236
AGGCCG
12
-
2
GCCTCG
UKMR15_RS10485
2411853
2413073
+
Genic
-371
NZ_LR595896.1
2412370
2412383
AGCGCG
13
-
2
GCTCGC
UKMR15_RS10485
2411853
2413073
+
Genic
-517
NZ_LR595896.1
2416986
2416998
AGGCG
12
-
2
CCTCG
UKMR15_RS10505
2415983
2418793
-
Genic
-1003
NZ_LR595896.1
2419982
2419994
ACGC
12
+
3
CACG
UKMR15_RS10515
2419460
2420794
-
Genic
-522
NZ_LR595896.1
2420605
2420618
ACGCAG
13
+
2
CAGACG
UKMR15_RS10515
2419460
2420794
-
Genic
-1145