Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3701 to 3725 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2442851
2442865
ACGCCG
14
+
2
CGCCGA
UKMR15_RS10615
2442427
2443242
+
Genic
-424
NZ_LR595896.1
2443413
2443427
AGAGCG
14
+
2
AGAGCG
UKMR15_RS10620
2443444
2444232
-
Intergenic
17
NZ_LR595896.1
2443822
2443834
CCGCGG
12
+
2
GCCGCG
UKMR15_RS10620
2443444
2444232
-
Genic
-378
NZ_LR595896.1
2443913
2443927
CCGGCG
14
+
2
GCGCCG
UKMR15_RS10620
2443444
2444232
-
Genic
-469
NZ_LR595896.1
2443936
2443948
AGC
12
+
4
AGC
UKMR15_RS10620
2443444
2444232
-
Genic
-492
NZ_LR595896.1
2446103
2446115
ACGGCG
12
-
2
TCGCCG
lpxA
2446043
2446831
-
Genic
-60
NZ_LR595896.1
2447254
2447267
AACTCG
13
-
2
GTTCGA
fabZ
2446887
2447354
-
Genic
-367
NZ_LR595896.1
2448011
2448025
AAGCCG
14
+
2
CGAAGC
lpxD
2447500
2448585
-
Genic
-511
NZ_LR595896.1
2449012
2449024
ATCCG
12
+
2
GATCC
UKMR15_RS10650
2448602
2449105
-
Genic
-410
NZ_LR595896.1
2449190
2449202
AACTGG
12
+
2
CTGGAA
bamA
2449173
2451482
-
Genic
-17
NZ_LR595896.1
2449293
2449306
ACGGCT
13
-
2
CCGTAG
bamA
2449173
2451482
-
Genic
-120
NZ_LR595896.1
2449573
2449585
AACGGC
12
-
2
TGCCGT
bamA
2449173
2451482
-
Genic
-400
NZ_LR595896.1
2450078
2450090
AACGTG
12
-
2
GTTCAC
bamA
2449173
2451482
-
Genic
-905
NZ_LR595896.1
2450211
2450224
AACGTG
13
-
2
TTCACG
bamA
2449173
2451482
-
Genic
-1038
NZ_LR595896.1
2450262
2450274
ACGTCG
12
+
2
ACGTCG
bamA
2449173
2451482
-
Genic
-1089
NZ_LR595896.1
2450379
2450391
ACGCGC
12
-
2
CGCGTG
bamA
2449173
2451482
-
Genic
-1206
NZ_LR595896.1
2452451
2452463
CCCGCG
12
+
2
CGCCCG
rseP
2451547
2452938
-
Genic
-904
NZ_LR595896.1
2454792
2454805
AGCGCG
13
+
2
CGAGCG
UKMR15_RS10670
2454167
2454988
-
Genic
-625
NZ_LR595896.1
2454879
2454894
AGCGCG
15
+
2
CGAGCG
UKMR15_RS10670
2454167
2454988
-
Genic
-712
NZ_LR595896.1
2455004
2455016
AGGCCC
12
-
2
CCTGGG
uppS
2454982
2455764
-
Genic
-22
NZ_LR595896.1
2455347
2455359
ACGCTC
12
-
2
CGTGAG
uppS
2454982
2455764
-
Genic
-365
NZ_LR595896.1
2456770
2456782
ACGGGC
12
-
2
TGCCCG
UKMR15_RS10685
2456463
2457176
-
Genic
-307
NZ_LR595896.1
2456916
2456928
AGCGCG
12
+
2
AGCGCG
UKMR15_RS10685
2456463
2457176
-
Genic
-453
NZ_LR595896.1
2457247
2457259
CCCGG
12
-
2
GCCGG
UKMR15_RS10685
2456463
2457176
-
Intergenic
-784
NZ_LR595896.1
2460215
2460227
ACGGGC
12
+
2
CGGGCA
map
2459639
2460454
+
Genic
-576