Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3751 to 3775 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2486240
2486252
ACCTCG
12
-
2
GTCGAG
alr
2485356
2486426
-
Genic
-884
NZ_LR595896.1
2487338
2487351
CCCGCG
13
-
2
GGGCGC
lplT
2486638
2487945
+
Genic
-700
NZ_LR595896.1
2487825
2487837
ACGATC
12
-
2
ATCGTG
lplT
2486638
2487945
+
Genic
-1187
NZ_LR595896.1
2489026
2489082
AAGCCG
56
-
9
GCTTCG
thiD
2488056
2488865
+
Intergenic
-970
NZ_LR595896.1
2490724
2490736
ACACCG
12
+
2
CACCGA
UKMR15_RS10810
2490243
2491631
-
Genic
-481
NZ_LR595896.1
2491730
2491742
AAGCCG
12
+
2
CGAAGC
rimI
2491618
2492115
-
Genic
-112
NZ_LR595896.1
2492290
2492302
CG
12
+
6
GC
tsaB
2492112
2492873
-
Genic
-178
NZ_LR595896.1
2493203
2493216
AAGTAC
13
+
2
CAAGTA
UKMR15_RS10825
2493043
2493312
+
Genic
-160
NZ_LR595896.1
2493818
2493831
CCG
13
+
4
CCG
UKMR15_RS10830
2493758
2495299
+
Genic
-60
NZ_LR595896.1
2494076
2494090
AGGCGC
14
+
2
AGGCGC
UKMR15_RS10830
2493758
2495299
+
Genic
-318
NZ_LR595896.1
2494391
2494403
ACGAGC
12
-
2
TGCTCG
UKMR15_RS10830
2493758
2495299
+
Genic
-633
NZ_LR595896.1
2494822
2494835
ACGCGC
13
-
2
CGCGTG
UKMR15_RS10830
2493758
2495299
+
Genic
-1064
NZ_LR595896.1
2495081
2495093
CCG
12
+
4
CGC
UKMR15_RS10830
2493758
2495299
+
Genic
-1323
NZ_LR595896.1
2495109
2495121
CCGCGG
12
+
2
CGGCCG
UKMR15_RS10830
2493758
2495299
+
Genic
-1351
NZ_LR595896.1
2495127
2495139
AACGGC
12
+
2
CGGCAA
UKMR15_RS10830
2493758
2495299
+
Genic
-1369
NZ_LR595896.1
2495242
2495255
CCGCG
13
-
2
GCGCG
UKMR15_RS10830
2493758
2495299
+
Genic
-1484
NZ_LR595896.1
2495335
2495348
CCCCG
13
+
2
CCCGC
UKMR15_RS10830
2493758
2495299
+
Intergenic
-1577
NZ_LR595896.1
2496417
2496430
AACGAC
13
+
2
ACGACA
aceA
2495691
2496998
+
Genic
-726
NZ_LR595896.1
2497004
2497016
AGGCGC
12
+
2
GCAGGC
aceA
2495691
2496998
+
Intergenic
-1313
NZ_LR595896.1
2497057
2497071
AAGACC
14
+
2
CAAGAC
aceA
2495691
2496998
+
Intergenic
-1366
NZ_LR595896.1
2498283
2498295
AACGCG
12
-
2
GTTCGC
UKMR15_RS10845
2497972
2498874
-
Genic
-311
NZ_LR595896.1
2498295
2498307
AGCGCG
12
+
2
CGCGAG
UKMR15_RS10845
2497972
2498874
-
Genic
-323
NZ_LR595896.1
2498369
2498381
ACGCG
12
+
2
GCGAC
UKMR15_RS10845
2497972
2498874
-
Genic
-397
NZ_LR595896.1
2499215
2499227
CCCG
12
-
3
GGCG
UKMR15_RS10850
2499013
2499816
+
Genic
-202
NZ_LR595896.1
2500800
2500813
AGC
13
-
4
GCT
UKMR15_RS10855
2499869
2501461
+
Genic
-931