Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3801 to 3825 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2515895
2515907
AACCCG
12
-
2
GGTTCG
UKMR15_RS10935
2514244
2516196
-
Genic
-1651
NZ_LR595896.1
2516107
2516119
CCGCG
12
-
2
CGCGG
UKMR15_RS10935
2514244
2516196
-
Genic
-1863
NZ_LR595896.1
2516285
2516299
CCCGCG
14
-
2
GCGGGC
fabI
2516317
2517108
+
Intergenic
18
NZ_LR595896.1
2517561
2517574
CCG
13
-
4
GGC
UKMR15_RS10945
2517360
2517713
-
Genic
-201
NZ_LR595896.1
2517882
2517894
ACGCG
12
+
2
CGCGA
UKMR15_RS10950
2517973
2518188
+
Intergenic
79
NZ_LR595896.1
2519305
2519318
AGCCGG
13
-
2
CTCCGG
UKMR15_RS10955
2518406
2520739
-
Genic
-899
NZ_LR595896.1
2520074
2520087
AGATGC
13
+
2
TGCAGA
UKMR15_RS10955
2518406
2520739
-
Genic
-1668
NZ_LR595896.1
2520120
2520132
ACG
12
+
4
CGA
UKMR15_RS10955
2518406
2520739
-
Genic
-1714
NZ_LR595896.1
2520397
2520409
CCCCCG
12
+
2
CCCGCC
UKMR15_RS10955
2518406
2520739
-
Genic
-1991
NZ_LR595896.1
2520411
2520425
AACGCG
14
+
2
CGAACG
UKMR15_RS10955
2518406
2520739
-
Genic
-2005
NZ_LR595896.1
2523524
2523536
CCCGCG
12
+
2
CCGCGC
UKMR15_RS10965
2523107
2523445
-
Intergenic
-417
NZ_LR595896.1
2523907
2523919
AAACCG
12
+
2
CGAAAC
UKMR15_RS10970
2523924
2524490
+
Intergenic
5
NZ_LR595896.1
2524462
2524474
ACGCCG
12
+
2
CGACGC
UKMR15_RS10970
2523924
2524490
+
Genic
-538
NZ_LR595896.1
2525318
2525330
CCGCG
12
-
2
CGGCG
map
2524564
2525382
-
Genic
-754
NZ_LR595896.1
2526736
2526748
CCGGCG
12
+
2
GCGCCG
UKMR15_RS10985
2525890
2528598
-
Genic
-846
NZ_LR595896.1
2526957
2526969
ACGCG
12
-
2
CGTCG
UKMR15_RS10985
2525890
2528598
-
Genic
-1067
NZ_LR595896.1
2527265
2527277
ACGGCG
12
-
2
CGCCGT
UKMR15_RS10985
2525890
2528598
-
Genic
-1375
NZ_LR595896.1
2527775
2527787
ACGCGC
12
+
2
CGCGCA
UKMR15_RS10985
2525890
2528598
-
Genic
-1885
NZ_LR595896.1
2528171
2528187
ATCGGC
16
+
2
CGGCAT
UKMR15_RS10985
2525890
2528598
-
Genic
-2281
NZ_LR595896.1
2528182
2528209
ACGCCG
27
-
4
TCGGCG
UKMR15_RS10985
2525890
2528598
-
Genic
-2292
NZ_LR595896.1
2528550
2528562
ACGGGC
12
-
2
GCCCGT
UKMR15_RS10985
2525890
2528598
-
Genic
-2660
NZ_LR595896.1
2532031
2532043
AATCG
12
+
2
CGAAT
UKMR15_RS11005
2532090
2532908
-
Intergenic
47
NZ_LR595896.1
2532047
2532059
CCGCGG
12
+
2
CGCGGC
UKMR15_RS11005
2532090
2532908
-
Intergenic
31
NZ_LR595896.1
2532070
2532083
CCGCG
13
-
2
GCGGC
UKMR15_RS11005
2532090
2532908
-
Intergenic
7
NZ_LR595896.1
2532156
2532169
ACG
13
-
4
TCG
UKMR15_RS11005
2532090
2532908
-
Genic
-66