Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3851 to 3875 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2548195
2548208
CG
13
+
6
CG
UKMR15_RS11060
2542680
2551619
-
Genic
-5515
NZ_LR595896.1
2548884
2548896
ATCGGC
12
+
2
ATCGGC
UKMR15_RS11060
2542680
2551619
-
Genic
-6204
NZ_LR595896.1
2549506
2549519
CCGCG
13
-
2
GCGGC
UKMR15_RS11060
2542680
2551619
-
Genic
-6826
NZ_LR595896.1
2549523
2549535
CCCGCG
12
-
2
GGCGCG
UKMR15_RS11060
2542680
2551619
-
Genic
-6843
NZ_LR595896.1
2549548
2549560
ACATCG
12
-
2
TGTCGA
UKMR15_RS11060
2542680
2551619
-
Genic
-6868
NZ_LR595896.1
2551368
2551381
CCGCG
13
+
2
CGCGC
UKMR15_RS11060
2542680
2551619
-
Genic
-8688
NZ_LR595896.1
2551575
2551587
AGCCGC
12
+
2
CGCAGC
UKMR15_RS11060
2542680
2551619
-
Genic
-8895
NZ_LR595896.1
2552024
2552038
CCGCG
14
+
2
GCCGC
UKMR15_RS11065
2551703
2553103
-
Genic
-321
NZ_LR595896.1
2552048
2552060
ACGCCG
12
+
2
ACGCCG
UKMR15_RS11065
2551703
2553103
-
Genic
-345
NZ_LR595896.1
2553411
2553423
CCGCG
12
+
2
CGCGC
UKMR15_RS11070
2553473
2554774
-
Intergenic
50
NZ_LR595896.1
2553524
2553536
AGCGGC
12
+
2
GGCAGC
UKMR15_RS11070
2553473
2554774
-
Genic
-51
NZ_LR595896.1
2553549
2553561
ACGCCG
12
+
2
ACGCCG
UKMR15_RS11070
2553473
2554774
-
Genic
-76
NZ_LR595896.1
2553669
2553682
ACAGCG
13
+
2
ACAGCG
UKMR15_RS11070
2553473
2554774
-
Genic
-196
NZ_LR595896.1
2553737
2553749
ACCACG
12
+
2
ACGACC
UKMR15_RS11070
2553473
2554774
-
Genic
-264
NZ_LR595896.1
2553909
2553922
CCCGCG
13
+
2
CCGCGC
UKMR15_RS11070
2553473
2554774
-
Genic
-436
NZ_LR595896.1
2554129
2554141
CCGCG
12
+
2
CGCCG
UKMR15_RS11070
2553473
2554774
-
Genic
-656
NZ_LR595896.1
2555609
2555621
ACCTCG
12
+
2
CTCGAC
UKMR15_RS11075
2554842
2556680
-
Genic
-767
NZ_LR595896.1
2556029
2556041
ACG
12
-
4
GTC
UKMR15_RS11075
2554842
2556680
-
Genic
-1187
NZ_LR595896.1
2556589
2556602
CCGCGG
13
+
2
CGGCCG
UKMR15_RS11075
2554842
2556680
-
Genic
-1747
NZ_LR595896.1
2557051
2557065
ACG
14
+
4
GAC
cysC
2556731
2558200
-
Genic
-320
NZ_LR595896.1
2557283
2557295
CCCGCG
12
-
2
GGCGCG
cysC
2556731
2558200
-
Genic
-552
NZ_LR595896.1
2557307
2557319
CCCGCG
12
-
2
GGCGCG
cysC
2556731
2558200
-
Genic
-576
NZ_LR595896.1
2557348
2557360
CCCGG
12
+
2
CGGCC
cysC
2556731
2558200
-
Genic
-617
NZ_LR595896.1
2558733
2558746
ATGGCC
13
+
2
CATGGC
UKMR15_RS11085
2558785
2559003
+
Intergenic
39
NZ_LR595896.1
2559608
2559622
ACACCG
14
+
2
CACCGA
UKMR15_RS11090
2559672
2560907
+
Intergenic
50