Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3901 to 3925 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2582601
2582613
ACGCAT
12
+
2
ATACGC
UKMR15_RS11190
2581827
2582630
+
Genic
-774
NZ_LR595896.1
2583176
2583188
AAATG
12
-
2
TTTCA
UKMR15_RS11195
2582910
2583182
-
Genic
-266
NZ_LR595896.1
2588409
2588421
AGCTCG
12
+
2
GCTCGA
UKMR15_RS11220
2588499
2589797
+
Intergenic
78
NZ_LR595896.1
2589097
2589109
CCCG
12
-
3
GGCG
UKMR15_RS11220
2588499
2589797
+
Genic
-598
NZ_LR595896.1
2589660
2589672
CCGCG
12
-
2
GCGGC
UKMR15_RS11220
2588499
2589797
+
Genic
-1161
NZ_LR595896.1
2589816
2589830
ACGAGG
14
-
2
TCGTCC
UKMR15_RS11225
2589777
2590322
-
Genic
-39
NZ_LR595896.1
2591914
2591926
AGCGGC
12
-
2
GCCGCT
UKMR15_RS11230
2590391
2591578
+
Intergenic
-1523
NZ_LR595896.1
2592246
2592258
CCCG
12
+
3
CGCC
UKMR15_RS11235
2592305
2593081
-
Intergenic
47
NZ_LR595896.1
2594979
2594993
CCCGCG
14
+
2
CGCCCG
UKMR15_RS11245
2594339
2595241
-
Genic
-640
NZ_LR595896.1
2595375
2595388
CCGCG
13
-
2
GCGCG
UKMR15_RS11250
2595286
2595903
-
Genic
-89
NZ_LR595896.1
2597525
2597537
ACGGGC
12
+
2
ACGGGC
UKMR15_RS11260
2597111
2597776
-
Genic
-414
NZ_LR595896.1
2598678
2598690
AAGCCG
12
+
2
CGAAGC
UKMR15_RS11270
2598569
2599399
-
Genic
-109
NZ_LR595896.1
2599972
2599984
CCGCG
12
-
2
GCGCG
UKMR15_RS11275
2599639
2600529
-
Genic
-333
NZ_LR595896.1
2602055
2602067
CCGGCG
12
+
2
CGGCGC
UKMR15_RS11285
2601712
2602236
+
Genic
-343
NZ_LR595896.1
2603227
2603239
CCCG
12
+
3
CGCC
hslO
2602275
2603225
+
Intergenic
-952
NZ_LR595896.1
2603326
2603339
CCGCG
13
+
2
CGCGC
UKMR15_RS11295
2603309
2603656
+
Genic
-17
NZ_LR595896.1
2603625
2603638
ACGGCT
13
+
2
CGGCTA
UKMR15_RS11295
2603309
2603656
+
Genic
-316
NZ_LR595896.1
2604022
2604036
CCGGCG
14
+
2
CGCCGG
ftsB
2603879
2604310
-
Genic
-143
NZ_LR595896.1
2605392
2605404
AGCTCG
12
+
2
TCGAGC
eno
2604402
2605685
-
Genic
-990
NZ_LR595896.1
2607908
2607921
CCGCG
13
+
2
CGCCG
UKMR15_RS11315
2606640
2608301
-
Genic
-1268
NZ_LR595896.1
2608570
2608582
CCGGCG
12
+
2
GCGCCG
UKMR15_RS11320
2608558
2609385
-
Genic
-12
NZ_LR595896.1
2609571
2609583
ATCCGC
12
-
2
CGGATG
UKMR15_RS11325
2609422
2611950
-
Genic
-149
NZ_LR595896.1
2609776
2609788
CCCG
12
+
3
CGCC
UKMR15_RS11325
2609422
2611950
-
Genic
-354
NZ_LR595896.1
2609877
2609890
AGCGCC
13
+
2
CCAGCG
UKMR15_RS11325
2609422
2611950
-
Genic
-455
NZ_LR595896.1
2610240
2610252
CCGGCG
12
+
2
CGGCGC
UKMR15_RS11325
2609422
2611950
-
Genic
-818