Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3951 to 3975 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2626050
2626062
AACTTG
12
+
2
TTGAAC
iscA
2625999
2626322
-
Genic
-51
NZ_LR595896.1
2626364
2626378
AAACCC
14
+
2
CCAAAC
iscU
2626405
2626812
-
Intergenic
27
NZ_LR595896.1
2627807
2627821
AAGGGC
14
-
2
CTTGCC
UKMR15_RS11400
2626878
2628101
-
Genic
-929
NZ_LR595896.1
2628602
2628615
AGCGCC
13
-
2
CGCTGG
iscR
2628170
2628709
-
Genic
-432
NZ_LR595896.1
2629171
2629183
AGATCG
12
-
2
TCGATC
UKMR15_RS11410
2628811
2629290
-
Genic
-360
NZ_LR595896.1
2629546
2629559
CCG
13
-
4
GGC
UKMR15_RS11415
2629382
2629591
-
Genic
-164
NZ_LR595896.1
2629915
2629927
CCCG
12
+
3
CCGC
UKMR15_RS11420
2629753
2631204
-
Genic
-162
NZ_LR595896.1
2630363
2630377
ACGGCG
14
-
2
CGTCGC
UKMR15_RS11420
2629753
2631204
-
Genic
-610
NZ_LR595896.1
2631458
2631473
CCCGCG
15
+
2
CCGCGC
UKMR15_RS11425
2631346
2632068
-
Genic
-112
NZ_LR595896.1
2632256
2632268
AACCCG
12
+
2
AACCCG
UKMR15_RS11430
2632251
2633063
+
Genic
-5
NZ_LR595896.1
2632918
2632930
ACAGCG
12
-
2
GCTGTC
UKMR15_RS11430
2632251
2633063
+
Genic
-667
NZ_LR595896.1
2633300
2633312
AAGCGG
12
-
2
TTCCGC
UKMR15_RS11435
2633192
2634655
-
Genic
-108
NZ_LR595896.1
2634190
2634202
AACGCG
12
-
2
GTTCGC
UKMR15_RS11435
2633192
2634655
-
Genic
-998
NZ_LR595896.1
2634665
2634677
AAAAAC
12
+
2
AAAAAC
UKMR15_RS11435
2633192
2634655
-
Intergenic
-1473
NZ_LR595896.1
2635196
2635208
AAGGCG
12
-
2
CTTCGC
pbpG
2634771
2635892
-
Genic
-425
NZ_LR595896.1
2635759
2635771
ACCGCC
12
-
2
TGGCGG
pbpG
2634771
2635892
-
Genic
-988
NZ_LR595896.1
2636015
2636028
AGGGCG
13
-
2
TCGCCC
pbpG
2634771
2635892
-
Intergenic
-1244
NZ_LR595896.1
2637055
2637069
CCG
14
+
4
CGC
UKMR15_RS11445
2636562
2637131
+
Genic
-493
NZ_LR595896.1
2637507
2637519
ACGCGG
12
-
2
TCCGCG
lpdA
2637396
2639165
-
Genic
-111
NZ_LR595896.1
2638101
2638113
AAGACC
12
-
2
GTCTTG
lpdA
2637396
2639165
-
Genic
-705
NZ_LR595896.1
2638777
2638789
ACGAGC
12
+
2
CGAGCA
lpdA
2637396
2639165
-
Genic
-1381
NZ_LR595896.1
2638902
2638918
ACCCGC
16
-
2
GCGGGT
lpdA
2637396
2639165
-
Genic
-1506
NZ_LR595896.1
2638979
2638991
AAGATC
12
-
2
CTTGAT
lpdA
2637396
2639165
-
Genic
-1583
NZ_LR595896.1
2639565
2639579
ACAGCG
14
+
2
CGACAG
lpdA
2637396
2639165
-
Intergenic
-2169
NZ_LR595896.1
2640222
2640234
CCGCGG
12
+
2
CGCGGC
aceE
2641250
2643946
-
Intergenic
1016