Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3976 to 4000 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2640313
2640325
ACGGGC
12
-
2
CCCGTG
aceE
2641250
2643946
-
Intergenic
925
NZ_LR595896.1
2640412
2640424
ACCGGC
12
-
2
GGTGCC
aceE
2641250
2643946
-
Intergenic
826
NZ_LR595896.1
2640459
2640488
CCCGCG
29
-
4
GGCGCG
aceE
2641250
2643946
-
Intergenic
762
NZ_LR595896.1
2640926
2640940
AAGGTG
14
-
2
ACCTTC
aceE
2641250
2643946
-
Intergenic
310
NZ_LR595896.1
2641213
2641225
AGCGGG
12
+
2
AGCGGG
aceE
2641250
2643946
-
Intergenic
25
NZ_LR595896.1
2641753
2641765
ACGCCG
12
-
2
GTCGGC
aceE
2641250
2643946
-
Genic
-503
NZ_LR595896.1
2641876
2641889
AGCAGG
13
-
2
CTCCTG
aceE
2641250
2643946
-
Genic
-626
NZ_LR595896.1
2642499
2642511
ACCGGC
12
+
2
CCGGCA
aceE
2641250
2643946
-
Genic
-1249
NZ_LR595896.1
2642934
2642946
ACTCCG
12
+
2
CCGACT
aceE
2641250
2643946
-
Genic
-1684
NZ_LR595896.1
2643104
2643116
AACGGC
12
-
2
TTGCCG
aceE
2641250
2643946
-
Genic
-1854
NZ_LR595896.1
2643227
2643239
ACGGCG
12
-
2
TCGCCG
aceE
2641250
2643946
-
Genic
-1977
NZ_LR595896.1
2643644
2643656
ATCGCG
12
+
2
ATCGCG
aceE
2641250
2643946
-
Genic
-2394
NZ_LR595896.1
2644803
2644815
AGCGCG
12
+
2
CGCGAG
UKMR15_RS11470
2644219
2646729
+
Genic
-584
NZ_LR595896.1
2645879
2645891
AGATGC
12
+
2
GCAGAT
UKMR15_RS11470
2644219
2646729
+
Genic
-1660
NZ_LR595896.1
2646055
2646067
AGCGCG
12
-
2
CGCTCG
UKMR15_RS11470
2644219
2646729
+
Genic
-1836
NZ_LR595896.1
2646769
2646781
ACG
12
+
4
CGA
UKMR15_RS11475
2646726
2647364
+
Genic
-43
NZ_LR595896.1
2647254
2647266
AGCATC
12
+
2
GCATCA
UKMR15_RS11475
2646726
2647364
+
Genic
-528
NZ_LR595896.1
2647899
2647911
AGCCCG
12
+
2
CCGAGC
folD
2647680
2648537
+
Genic
-219
NZ_LR595896.1
2648519
2648534
CCGCGG
15
+
2
GCCGCG
folD
2647680
2648537
+
Genic
-839
NZ_LR595896.1
2652751
2652765
ACTGCG
14
-
2
CAGTCG
dinB
2651614
2652834
-
Genic
-1137
NZ_LR595896.1
2653305
2653317
AAAAAC
12
+
2
AAAAAC
UKMR15_RS11495
2653389
2653465
-
Intergenic
72
NZ_LR595896.1
2655132
2655145
ACG
13
-
4
CGT
UKMR15_RS11505
2654993
2656378
+
Genic
-139
NZ_LR595896.1
2657543
2657556
ATCGCC
13
-
2
GCGATG
UKMR15_RS11510
2656629
2660354
+
Genic
-914
NZ_LR595896.1
2657653
2657665
AGCGCG
12
+
2
GCGCGA
UKMR15_RS11510
2656629
2660354
+
Genic
-1024
NZ_LR595896.1
2658705
2658717
AACGCG
12
-
2
TCGCGT
UKMR15_RS11510
2656629
2660354
+
Genic
-2076