Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 4001 to 4025 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2662290
2662306
ACGGCG
16
+
2
GGCGAC
narJ
2661901
2662605
+
Genic
-389
NZ_LR595896.1
2662487
2662501
CCCCGG
14
+
2
CGGCCC
narJ
2661901
2662605
+
Genic
-586
NZ_LR595896.1
2662567
2662580
CCGCG
13
+
2
CGCCG
narJ
2661901
2662605
+
Genic
-666
NZ_LR595896.1
2662939
2662953
AGCGCG
14
-
2
CGCTCG
narI
2662642
2663328
+
Genic
-297
NZ_LR595896.1
2663606
2663620
CCCGCG
14
-
2
GGGCGC
UKMR15_RS11530
2663470
2665404
+
Genic
-136
NZ_LR595896.1
2664374
2664386
ACGCCG
12
+
2
CGACGC
UKMR15_RS11530
2663470
2665404
+
Genic
-904
NZ_LR595896.1
2665405
2665417
AACGAG
12
+
2
AACGAG
UKMR15_RS11530
2663470
2665404
+
Intergenic
-1935
NZ_LR595896.1
2666166
2666178
CCGCG
12
-
2
GCGGC
UKMR15_RS11535
2665428
2666129
+
Intergenic
-738
NZ_LR595896.1
2666347
2666359
ACGTCG
12
+
2
CGACGT
xth
2666274
2667050
+
Genic
-73
NZ_LR595896.1
2667664
2667677
AGGCGG
13
-
2
CGCCTC
ntrC
2667338
2668873
-
Genic
-326
NZ_LR595896.1
2667957
2667970
AGCCGC
13
+
2
GCAGCC
ntrC
2667338
2668873
-
Genic
-619
NZ_LR595896.1
2669012
2669025
AGCCCG
13
+
2
GAGCCC
UKMR15_RS11550
2668911
2670053
-
Genic
-101
NZ_LR595896.1
2669490
2669506
AGCGCG
16
-
2
TCGCGC
UKMR15_RS11550
2668911
2670053
-
Genic
-579
NZ_LR595896.1
2669527
2669540
CCGCG
13
+
2
GCGCC
UKMR15_RS11550
2668911
2670053
-
Genic
-616
NZ_LR595896.1
2669926
2669941
ACGAGC
15
+
2
CGAGCA
UKMR15_RS11550
2668911
2670053
-
Genic
-1015
NZ_LR595896.1
2670278
2670290
AGCAGG
12
-
2
GCTCCT
glnA
2670220
2671635
-
Genic
-58
NZ_LR595896.1
2670972
2670985
AGGGCC
13
-
2
CTGGCC
glnA
2670220
2671635
-
Genic
-752
NZ_LR595896.1
2671586
2671598
ACGAGG
12
-
2
CGTCCT
glnA
2670220
2671635
-
Genic
-1366
NZ_LR595896.1
2673531
2673544
ATC
13
-
4
GAT
UKMR15_RS11565
2672737
2673555
-
Genic
-794
NZ_LR595896.1
2673840
2673852
AGCGCG
12
+
2
AGCGCG
UKMR15_RS11570
2673552
2674385
-
Genic
-288
NZ_LR595896.1
2674887
2674900
CCCGG
13
-
2
GCCGG
UKMR15_RS11575
2674924
2675913
-
Intergenic
24
NZ_LR595896.1
2675610
2675622
AAG
12
+
4
GAA
UKMR15_RS11575
2674924
2675913
-
Genic
-686
NZ_LR595896.1
2678043
2678055
AGGCGC
12
-
2
CTGCGC
UKMR15_RS11580
2675930
2676922
-
Intergenic
-2113
NZ_LR595896.1
2678381
2678393
CCGCG
12
-
2
CGGCG
UKMR15_RS11580
2675930
2676922
-
Intergenic
-2451
NZ_LR595896.1
2678834
2678847
CG
13
+
6
CG
UKMR15_RS11580
2675930
2676922
-
Intergenic
-2904