Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 4051 to 4075 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2699620
2699632
ACGCCG
12
+
2
CGCCGA
UKMR15_RS11670
2699475
2700134
-
Genic
-145
NZ_LR595896.1
2699889
2699901
CCCGCG
12
+
2
CCCGCG
UKMR15_RS11670
2699475
2700134
-
Genic
-414
NZ_LR595896.1
2700850
2700863
CCGCG
13
+
2
CGCCG
UKMR15_RS11675
2700134
2701822
-
Genic
-716
NZ_LR595896.1
2703475
2703489
AGCGCG
14
+
2
CGAGCG
hutH
2702565
2704088
-
Genic
-910
NZ_LR595896.1
2704193
2704205
CCGCG
12
-
2
GCGGC
hutH
2702565
2704088
-
Intergenic
-1628
NZ_LR595896.1
2704265
2704278
CCGCG
13
-
2
GCGGC
hutH
2702565
2704088
-
Intergenic
-1700
NZ_LR595896.1
2706138
2706151
ACGCC
13
+
2
CGCCA
UKMR15_RS11695
2706114
2706905
-
Genic
-24
NZ_LR595896.1
2706478
2706490
ACGCCG
12
+
2
CGACGC
UKMR15_RS11695
2706114
2706905
-
Genic
-364
NZ_LR595896.1
2706721
2706735
AGCGCG
14
-
2
CGCGCT
UKMR15_RS11695
2706114
2706905
-
Genic
-607
NZ_LR595896.1
2706777
2706793
AAATCG
16
+
2
TCGAAA
UKMR15_RS11695
2706114
2706905
-
Genic
-663
NZ_LR595896.1
2707509
2707521
ATCGGC
12
+
2
GCATCG
UKMR15_RS11700
2707010
2708020
-
Genic
-499
NZ_LR595896.1
2708936
2708961
AAACGC
25
+
4
ACGCAA
UKMR15_RS11705
2709232
2709945
-
Intergenic
271
NZ_LR595896.1
2709397
2709409
ACCTCG
12
+
2
ACCTCG
UKMR15_RS11705
2709232
2709945
-
Genic
-165
NZ_LR595896.1
2709564
2709576
ATGCCC
12
+
2
CATGCC
UKMR15_RS11705
2709232
2709945
-
Genic
-332
NZ_LR595896.1
2709852
2709864
CCG
12
+
4
CGC
UKMR15_RS11705
2709232
2709945
-
Genic
-620
NZ_LR595896.1
2711420
2711432
AACATG
12
-
2
TTCATG
cysC
2710811
2711431
-
Genic
-609
NZ_LR595896.1
2711860
2711873
ACGCGG
13
-
2
CCGCGT
UKMR15_RS11720
2711562
2713022
-
Genic
-298
NZ_LR595896.1
2711899
2711911
CCCG
12
+
3
CGCC
UKMR15_RS11720
2711562
2713022
-
Genic
-337
NZ_LR595896.1
2712027
2712039
CCGCG
12
+
2
GCGCC
UKMR15_RS11720
2711562
2713022
-
Genic
-465
NZ_LR595896.1
2712855
2712868
CCGCG
13
+
2
CGCGC
UKMR15_RS11720
2711562
2713022
-
Genic
-1293
NZ_LR595896.1
2714661
2714673
CCGCGG
12
+
2
CGCGGC
UKMR15_RS11725
2713442
2714608
+
Intergenic
-1219
NZ_LR595896.1
2714964
2714976
ACGGC
12
+
2
CGGCA
UKMR15_RS11725
2713442
2714608
+
Intergenic
-1522
NZ_LR595896.1
2715437
2715449
AGCCCG
12
-
2
GGCTCG
UKMR15_RS11730
2715410
2717698
+
Genic
-27
NZ_LR595896.1
2715844
2715856
CCG
12
-
4
GCG
UKMR15_RS11730
2715410
2717698
+
Genic
-434
NZ_LR595896.1
2717093
2717105
AGCGCG
12
-
2
CGCTCG
UKMR15_RS11730
2715410
2717698
+
Genic
-1683