Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 4101 to 4125 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2728901
2728914
AGCGCG
13
-
2
CGCGCT
UKMR15_RS11790
2728756
2730072
+
Genic
-145
NZ_LR595896.1
2729231
2729244
AGCGCG
13
-
2
GCTCGC
UKMR15_RS11790
2728756
2730072
+
Genic
-475
NZ_LR595896.1
2729655
2729667
CCCGCG
12
-
2
GGCGCG
UKMR15_RS11790
2728756
2730072
+
Genic
-899
NZ_LR595896.1
2729903
2729915
AGC
12
-
4
GCT
UKMR15_RS11790
2728756
2730072
+
Genic
-1147
NZ_LR595896.1
2729930
2729942
CCCGCG
12
+
2
CGCGCC
UKMR15_RS11790
2728756
2730072
+
Genic
-1174
NZ_LR595896.1
2730301
2730313
ACGTCG
12
+
2
TCGACG
UKMR15_RS11795
2730049
2730738
-
Genic
-252
NZ_LR595896.1
2731711
2731723
AAGTCG
12
+
2
CGAAGT
hemN
2730750
2732201
-
Genic
-961
NZ_LR595896.1
2731945
2731957
AGATGC
12
+
2
GCAGAT
hemN
2730750
2732201
-
Genic
-1195
NZ_LR595896.1
2733976
2733990
AGCGCG
14
-
2
GCGCTC
UKMR15_RS11805
2732350
2734272
-
Genic
-1626
NZ_LR595896.1
2734040
2734053
CCGCG
13
+
2
CCGCG
UKMR15_RS11805
2732350
2734272
-
Genic
-1690
NZ_LR595896.1
2734496
2734508
CCCGCG
12
+
2
CGCGCC
UKMR15_RS11810
2734594
2734809
+
Intergenic
86
NZ_LR595896.1
2734509
2734522
AATGCG
13
-
2
CGCATT
UKMR15_RS11810
2734594
2734809
+
Intergenic
72
NZ_LR595896.1
2735668
2735680
AGCGCG
12
-
2
GCTCGC
UKMR15_RS11815
2734806
2736002
+
Genic
-862
NZ_LR595896.1
2736028
2736040
CCGCG
12
+
2
CGCCG
UKMR15_RS11815
2734806
2736002
+
Intergenic
-1222
NZ_LR595896.1
2738213
2738225
CG
12
+
6
GC
sufC
2737975
2738745
+
Genic
-238
NZ_LR595896.1
2738440
2738453
AAGCGC
13
+
2
AGCGCA
sufC
2737975
2738745
+
Genic
-465
NZ_LR595896.1
2738946
2738958
AGCCGG
12
-
2
CGGCTC
sufD
2738750
2739985
+
Genic
-196
NZ_LR595896.1
2739300
2739312
CCGGCG
12
+
2
CGGCGC
sufD
2738750
2739985
+
Genic
-550
NZ_LR595896.1
2739367
2739379
ACGTGC
12
+
2
CACGTG
sufD
2738750
2739985
+
Genic
-617
NZ_LR595896.1
2739581
2739595
AGCGCG
14
-
2
CGCTCG
sufD
2738750
2739985
+
Genic
-831
NZ_LR595896.1
2741296
2741308
CCGCG
12
+
2
GCGCC
UKMR15_RS11840
2741216
2741707
+
Genic
-80
NZ_LR595896.1
2742716
2742728
ACGATC
12
-
2
GATCGT
UKMR15_RS11850
2742547
2742945
-
Genic
-169
NZ_LR595896.1
2743214
2743226
CCG
12
-
4
GCG
UKMR15_RS11855
2743037
2743525
+
Genic
-177
NZ_LR595896.1
2743250
2743264
ATCGGC
14
+
2
GCATCG
UKMR15_RS11855
2743037
2743525
+
Genic
-213
NZ_LR595896.1
2743478
2743491
ATCGCG
13
+
2
TCGCGA
UKMR15_RS11855
2743037
2743525
+
Genic
-441