Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 4151 to 4175 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2757848
2757860
AAGCCG
12
-
2
CGGCTT
UKMR15_RS11925
2757838
2759070
-
Genic
-10
NZ_LR595896.1
2757989
2758001
CCGCGG
12
+
2
CGGCCG
UKMR15_RS11925
2757838
2759070
-
Genic
-151
NZ_LR595896.1
2758478
2758490
AGGGCG
12
-
2
CGCCCT
UKMR15_RS11925
2757838
2759070
-
Genic
-640
NZ_LR595896.1
2760362
2760376
ACCGCG
14
-
2
CGCGGT
UKMR15_RS11940
2759809
2760846
-
Genic
-553
NZ_LR595896.1
2761646
2761660
ACCACG
14
-
2
TCGTGG
UKMR15_RS11945
2760874
2761668
-
Genic
-772
NZ_LR595896.1
2762813
2762825
ATATCG
12
+
2
ATCGAT
hisQ
2762400
2763089
-
Genic
-413
NZ_LR595896.1
2763098
2763110
ACGATC
12
-
2
CGTGAT
hisQ
2762400
2763089
-
Intergenic
-698
NZ_LR595896.1
2763177
2763189
ATCGCC
12
-
2
ATGGCG
hisQ
2762400
2763089
-
Intergenic
-777
NZ_LR595896.1
2763389
2763401
CG
12
+
6
GC
bamE
2763405
2763995
-
Intergenic
4
NZ_LR595896.1
2763505
2763517
AGCGCC
12
+
2
GCCAGC
bamE
2763405
2763995
-
Genic
-100
NZ_LR595896.1
2763903
2763917
AGCGCG
14
+
2
GCGAGC
bamE
2763405
2763995
-
Genic
-498
NZ_LR595896.1
2764228
2764240
AGCGCC
12
+
2
AGCGCC
bamE
2763405
2763995
-
Intergenic
-823
NZ_LR595896.1
2764818
2764831
AGCGCG
13
-
2
CTCGCG
UKMR15_RS11965
2764801
2765847
-
Genic
-17
NZ_LR595896.1
2764964
2764976
AGCGCG
12
+
2
CGAGCG
UKMR15_RS11965
2764801
2765847
-
Genic
-163
NZ_LR595896.1
2765096
2765110
ATCGCG
14
+
2
CGATCG
UKMR15_RS11965
2764801
2765847
-
Genic
-295
NZ_LR595896.1
2765573
2765587
ACGCCG
14
+
2
CGCCGA
UKMR15_RS11965
2764801
2765847
-
Genic
-772
NZ_LR595896.1
2768442
2768454
CCGCG
12
+
2
GCCGC
hpnI
2768268
2769446
-
Genic
-174
NZ_LR595896.1
2768831
2768845
AAGCCG
14
+
2
GCCGAA
hpnI
2768268
2769446
-
Genic
-563
NZ_LR595896.1
2769351
2769363
CCCGCG
12
-
2
GGCGCG
hpnI
2768268
2769446
-
Genic
-1083
NZ_LR595896.1
2769478
2769490
ACGGGG
12
+
2
GGGACG
hpnI
2768268
2769446
-
Intergenic
-1210
NZ_LR595896.1
2770428
2770440
ACCGAG
12
-
2
TCTCGG
UKMR15_RS11985
2770121
2771131
+
Genic
-307
NZ_LR595896.1
2770664
2770677
AACGCG
13
-
2
CGTTCG
UKMR15_RS11985
2770121
2771131
+
Genic
-543
NZ_LR595896.1
2771160
2771174
ACCGTC
14
-
2
CGGTGA
UKMR15_RS11985
2770121
2771131
+
Intergenic
-1039
NZ_LR595896.1
2771495
2771507
CCCCG
12
+
2
CGCCC
UKMR15_RS11985
2770121
2771131
+
Intergenic
-1374
NZ_LR595896.1
2772520
2772532
ACGCGT
12
+
2
TACGCG
pdxY
2773117
2773980
+
Intergenic
585