Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 4201 to 4225 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2785337
2785349
ACG
12
+
4
CGA
UKMR15_RS12030
2783515
2785380
+
Genic
-1822
NZ_LR595896.1
2785649
2785661
ACGAGC
12
+
2
AGCACG
otsA
2785442
2786818
-
Genic
-207
NZ_LR595896.1
2786882
2786895
CG
13
+
6
CG
otsB
2786815
2787624
-
Genic
-67
NZ_LR595896.1
2788208
2788220
CCGCG
12
+
2
GCCGC
UKMR15_RS12050
2787938
2788636
+
Genic
-270
NZ_LR595896.1
2788912
2788924
AGATGG
12
+
2
AGATGG
UKMR15_RS12055
2788663
2789109
+
Genic
-249
NZ_LR595896.1
2790702
2790716
AACGCG
14
+
2
GCGAAC
UKMR15_RS12065
2790127
2790804
-
Genic
-575
NZ_LR595896.1
2791094
2791106
AGCGCG
12
+
2
CGAGCG
UKMR15_RS12070
2790844
2791710
-
Genic
-250
NZ_LR595896.1
2791451
2791463
CCCGCG
12
+
2
CGCCCG
UKMR15_RS12070
2790844
2791710
-
Genic
-607
NZ_LR595896.1
2792362
2792374
CCGGCG
12
+
2
GCGCCG
UKMR15_RS12075
2791837
2792745
+
Genic
-525
NZ_LR595896.1
2792544
2792557
ACGCCG
13
-
2
GGCGTC
UKMR15_RS12075
2791837
2792745
+
Genic
-707
NZ_LR595896.1
2792628
2792641
CCGCG
13
+
2
GCGCC
UKMR15_RS12075
2791837
2792745
+
Genic
-791
NZ_LR595896.1
2793405
2793417
CCGCG
12
-
2
CGCGG
UKMR15_RS12080
2792910
2793422
+
Genic
-495
NZ_LR595896.1
2794081
2794093
ACGCC
12
+
2
ACGCC
UKMR15_RS12085
2794531
2794604
-
Intergenic
438
NZ_LR595896.1
2796645
2796658
AGCGCG
13
+
2
GCGCGA
uvrC
2795846
2798089
-
Genic
-799
NZ_LR595896.1
2796876
2796889
ACGCGG
13
-
2
CGTCCG
uvrC
2795846
2798089
-
Genic
-1030
NZ_LR595896.1
2797189
2797205
AGCGCG
16
+
2
CGCGAG
uvrC
2795846
2798089
-
Genic
-1343
NZ_LR595896.1
2798859
2798873
CCGCG
14
+
2
CGCGC
earP
2798304
2799524
+
Genic
-555
NZ_LR595896.1
2799094
2799106
CCGGCG
12
+
2
CGGCGC
earP
2798304
2799524
+
Genic
-790
NZ_LR595896.1
2799919
2799931
ACGAGT
12
-
2
CGTACT
efp
2799709
2800266
+
Genic
-210
NZ_LR595896.1
2801056
2801068
ACCGGC
12
+
2
CCGGCA
UKMR15_RS12120
2800537
2801934
+
Genic
-519
NZ_LR595896.1
2802588
2802600
AGCGCG
12
+
2
GCGAGC
nagZ
2802048
2803076
-
Genic
-540
NZ_LR595896.1
2802686
2802698
AGATCG
12
+
2
ATCGAG
nagZ
2802048
2803076
-
Genic
-638
NZ_LR595896.1
2804663
2804675
ACGCTC
12
-
2
GCGTGA
recO
2804311
2805138
-
Genic
-352
NZ_LR595896.1
2804696
2804708
ATCCGC
12
-
2
GCGGAT
recO
2804311
2805138
-
Genic
-385
NZ_LR595896.1
2804841
2804855
ACAGCG
14
+
2
CGACAG
recO
2804311
2805138
-
Genic
-530