Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 4226 to 4250 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2805030
2805052
CCGCG
22
-
4
GCGCG
recO
2804311
2805138
-
Genic
-719
NZ_LR595896.1
2805114
2805126
ACGCCG
12
-
2
GTCGGC
recO
2804311
2805138
-
Genic
-803
NZ_LR595896.1
2806833
2806845
AAGCCG
12
-
2
GCTTCG
UKMR15_RS12150
2806127
2807530
-
Genic
-706
NZ_LR595896.1
2807239
2807251
AAGGCG
12
-
2
TTCGCC
UKMR15_RS12150
2806127
2807530
-
Genic
-1112
NZ_LR595896.1
2808195
2808207
AGGCGC
12
+
2
GCAGGC
lepB
2807681
2808574
-
Genic
-514
NZ_LR595896.1
2808867
2808880
ACTGCG
13
+
2
ACTGCG
lepA
2808590
2810383
-
Genic
-277
NZ_LR595896.1
2809369
2809383
AAGCCG
14
+
2
GAAGCC
lepA
2808590
2810383
-
Genic
-779
NZ_LR595896.1
2809427
2809439
AAGCTG
12
-
2
AGCTTC
lepA
2808590
2810383
-
Genic
-837
NZ_LR595896.1
2810627
2810642
CCGCG
15
+
3
CGCGC
UKMR15_RS12165
2810625
2810879
-
Genic
-2
NZ_LR595896.1
2810933
2810945
ACCGCG
12
+
2
ACCGCG
UKMR15_RS12170
2810876
2812384
-
Genic
-57
NZ_LR595896.1
2811259
2811272
ACCGTC
13
+
2
CACCGT
UKMR15_RS12170
2810876
2812384
-
Genic
-383
NZ_LR595896.1
2813936
2813948
ACGCCG
12
-
2
TCGGCG
UKMR15_RS12180
2813459
2814061
-
Genic
-477
NZ_LR595896.1
2815173
2815185
CCG
12
+
4
CCG
fabF
2815334
2816572
-
Intergenic
149
NZ_LR595896.1
2815189
2815201
CCGCG
12
-
2
GCGGC
fabF
2815334
2816572
-
Intergenic
133
NZ_LR595896.1
2815369
2815382
AAGCCG
13
+
2
GCCGAA
fabF
2815334
2816572
-
Genic
-35
NZ_LR595896.1
2815734
2815746
ACGGCG
12
-
2
CGCCGT
fabF
2815334
2816572
-
Genic
-400
NZ_LR595896.1
2815914
2815926
ACGGCG
12
-
2
TCGCCG
fabF
2815334
2816572
-
Genic
-580
NZ_LR595896.1
2816262
2816274
ACGCCG
12
+
2
CGACGC
fabF
2815334
2816572
-
Genic
-928
NZ_LR595896.1
2816902
2816914
AAGCCG
12
-
2
TTCGGC
acpP
2816729
2816968
-
Genic
-173
NZ_LR595896.1
2818265
2818279
AGCGGC
14
+
2
CGGCAG
fabD
2817912
2818844
-
Genic
-353
NZ_LR595896.1
2818291
2818304
AAGGCG
13
-
2
CCTTCG
fabD
2817912
2818844
-
Genic
-379
NZ_LR595896.1
2820091
2820103
ACGCGT
12
+
2
ACGCGT
plsX
2819904
2821010
-
Genic
-187
NZ_LR595896.1
2822983
2822997
ACGGCG
14
+
2
CGGCGA
UKMR15_RS12240
2822946
2823668
+
Genic
-37
NZ_LR595896.1
2824197
2824210
CCG
13
+
4
CCG
UKMR15_RS12245
2823707
2824708
-
Genic
-490
NZ_LR595896.1
2824510
2824524
AACGCG
14
+
2
GAACGC
UKMR15_RS12245
2823707
2824708
-
Genic
-803