Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 4276 to 4300 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2839709
2839721
CCCGCG
12
-
2
GCGGGC
UKMR15_RS12310
2839183
2839845
-
Genic
-526
NZ_LR595896.1
2839907
2839919
CCG
12
+
4
CCG
UKMR15_RS12310
2839183
2839845
-
Intergenic
-724
NZ_LR595896.1
2841275
2841287
CCGCG
12
-
2
GCGGC
pncB
2839990
2841189
-
Intergenic
-1285
NZ_LR595896.1
2841703
2841715
AAGACG
12
+
2
ACGAAG
UKMR15_RS12320
2841458
2841781
+
Genic
-245
NZ_LR595896.1
2841714
2841726
CCCGCG
12
+
2
GCCCGC
UKMR15_RS12320
2841458
2841781
+
Genic
-256
NZ_LR595896.1
2841723
2841737
ACGCCG
14
+
2
CGCCGA
UKMR15_RS12320
2841458
2841781
+
Genic
-265
NZ_LR595896.1
2842707
2842720
ACGGGC
13
-
2
CCGTGC
UKMR15_RS12335
2842269
2842748
+
Genic
-438
NZ_LR595896.1
2842999
2843017
CCGCG
18
-
3
GCGCG
UKMR15_RS12335
2842269
2842748
+
Intergenic
-730
NZ_LR595896.1
2844570
2844586
AAGGCG
16
-
2
GCCTTC
UKMR15_RS12345
2844324
2844830
-
Genic
-246
NZ_LR595896.1
2845829
2845841
ACAGCG
12
-
2
CGCTGT
UKMR15_RS12355
2845514
2846920
+
Genic
-315
NZ_LR595896.1
2846050
2846062
ACGCCG
12
-
2
GGCGTC
UKMR15_RS12355
2845514
2846920
+
Genic
-536
NZ_LR595896.1
2846143
2846155
ACGATC
12
+
2
ACGATC
UKMR15_RS12355
2845514
2846920
+
Genic
-629
NZ_LR595896.1
2846225
2846237
CCGCGG
12
+
2
CGCGGC
UKMR15_RS12355
2845514
2846920
+
Genic
-711
NZ_LR595896.1
2846496
2846508
AGCCCG
12
-
2
GCTCGG
UKMR15_RS12355
2845514
2846920
+
Genic
-982
NZ_LR595896.1
2846912
2846924
AAGCCT
12
-
2
AGGCTT
UKMR15_RS12355
2845514
2846920
+
Genic
-1398
NZ_LR595896.1
2847551
2847563
CCCGCG
12
+
2
CCGCGC
UKMR15_RS12360
2847405
2847578
-
Genic
-146
NZ_LR595896.1
2847732
2847744
AGCGCG
12
-
2
CGCGCT
fumC
2847593
2848987
+
Genic
-139
NZ_LR595896.1
2849585
2849600
ACCGGC
15
+
2
CGGCAC
UKMR15_RS12370
2849466
2849972
-
Genic
-119
NZ_LR595896.1
2850071
2850093
AACGGC
22
-
3
GCCGTT
UKMR15_RS12375
2850154
2850348
-
Intergenic
61
NZ_LR595896.1
2850321
2850333
ACGGCG
12
-
2
CGTCGC
UKMR15_RS12375
2850154
2850348
-
Genic
-167
NZ_LR595896.1
2850368
2850380
ACGGCG
12
-
2
CGTCGC
UKMR15_RS12375
2850154
2850348
-
Intergenic
-214
NZ_LR595896.1
2850640
2850655
AAGCCG
15
+
2
CCGAAG
UKMR15_RS12375
2850154
2850348
-
Intergenic
-486
NZ_LR595896.1
2850682
2850747
AGGGCC
65
-
10
GGCCCT
UKMR15_RS12380
2850949
2851659
+
Intergenic
202
NZ_LR595896.1
2850745
2850784
AGCCCG
39
+
6
CCCGAG
UKMR15_RS12380
2850949
2851659
+
Intergenic
165
NZ_LR595896.1
2851873
2851885
ACGGCG
12
-
2
CGTCGC
UKMR15_RS12385
2851821
2854394
+
Genic
-52