Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 4301 to 4325 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2852276
2852288
AGCGCG
12
-
2
CTCGCG
UKMR15_RS12385
2851821
2854394
+
Genic
-455
NZ_LR595896.1
2852846
2852858
CCG
12
-
4
GGC
UKMR15_RS12385
2851821
2854394
+
Genic
-1025
NZ_LR595896.1
2853392
2853404
CCCGCG
12
-
2
GGCGCG
UKMR15_RS12385
2851821
2854394
+
Genic
-1571
NZ_LR595896.1
2853665
2853677
AGCCGC
12
+
2
CAGCCG
UKMR15_RS12385
2851821
2854394
+
Genic
-1844
NZ_LR595896.1
2854008
2854021
ACGCCG
13
+
2
CGACGC
UKMR15_RS12385
2851821
2854394
+
Genic
-2187
NZ_LR595896.1
2854062
2854082
AGCCGC
20
+
3
CGCAGC
UKMR15_RS12385
2851821
2854394
+
Genic
-2241
NZ_LR595896.1
2854262
2854276
CCCCG
14
+
2
CGCCC
UKMR15_RS12385
2851821
2854394
+
Genic
-2441
NZ_LR595896.1
2854305
2854317
CCGCG
12
+
2
CCGCG
UKMR15_RS12385
2851821
2854394
+
Genic
-2484
NZ_LR595896.1
2855199
2855212
AATGCG
13
-
2
CATTCG
UKMR15_RS12390
2854484
2855455
-
Genic
-715
NZ_LR595896.1
2855433
2855445
AGATCG
12
+
2
CGAGAT
UKMR15_RS12390
2854484
2855455
-
Genic
-949
NZ_LR595896.1
2856368
2856380
ACCGGC
12
-
2
TGCCGG
UKMR15_RS12395
2855512
2856897
-
Genic
-856
NZ_LR595896.1
2857516
2857528
AAAACG
12
+
2
ACGAAA
UKMR15_RS12400
2857396
2857632
-
Genic
-120
NZ_LR595896.1
2858701
2858714
CCGCG
13
+
2
CGCCG
UKMR15_RS12405
2857845
2859062
+
Genic
-856
NZ_LR595896.1
2859044
2859056
ACGGCG
12
-
2
TCGCCG
UKMR15_RS12405
2857845
2859062
+
Genic
-1199
NZ_LR595896.1
2859899
2859912
CCGCG
13
-
2
GCGGC
UKMR15_RS12410
2859324
2861177
+
Genic
-575
NZ_LR595896.1
2861310
2861322
CCGCG
12
-
2
CGGCG
UKMR15_RS12415
2861385
2861888
+
Intergenic
63
NZ_LR595896.1
2861632
2861647
AGCGCG
15
-
2
CGCGCT
UKMR15_RS12415
2861385
2861888
+
Genic
-247
NZ_LR595896.1
2862124
2862136
AAGCGG
12
-
2
TTCCGC
UKMR15_RS12420
2862016
2863479
-
Genic
-108
NZ_LR595896.1
2863014
2863026
AACGCG
12
-
2
GTTCGC
UKMR15_RS12420
2862016
2863479
-
Genic
-998
NZ_LR595896.1
2863489
2863501
AAAAAC
12
+
2
AAAAAC
UKMR15_RS12420
2862016
2863479
-
Intergenic
-1473
NZ_LR595896.1
2863553
2863566
AAAAGC
13
-
2
CTTTTG
pmbA
2863614
2864984
-
Intergenic
48
NZ_LR595896.1
2863787
2863800
CCGCG
13
+
2
CGCCG
pmbA
2863614
2864984
-
Genic
-173
NZ_LR595896.1
2864633
2864645
AAGCCG
12
-
2
TTCGGC
pmbA
2863614
2864984
-
Genic
-1019
NZ_LR595896.1
2864828
2864842
ACACCG
14
+
2
CACCGA
pmbA
2863614
2864984
-
Genic
-1214
NZ_LR595896.1
2865297
2865309
ATCGGC
12
-
2
ATGCCG
UKMR15_RS12430
2865130
2865738
+
Genic
-167