Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 4351 to 4375 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2888860
2888872
CCG
12
+
4
CGC
UKMR15_RS12550
2887860
2888702
+
Intergenic
-1000
NZ_LR595896.1
2888890
2888902
ATCGGC
12
-
2
CGATGC
UKMR15_RS12555
2889045
2889968
-
Intergenic
143
NZ_LR595896.1
2889460
2889472
AACGGC
12
-
2
TGCCGT
UKMR15_RS12555
2889045
2889968
-
Genic
-415
NZ_LR595896.1
2890132
2890144
AAGCG
12
-
2
CGCTT
mltB
2890147
2891406
+
Intergenic
3
NZ_LR595896.1
2890306
2890326
AGCCGC
20
+
3
CGCAGC
mltB
2890147
2891406
+
Genic
-159
NZ_LR595896.1
2892550
2892562
ATCGGC
12
-
2
CCGATG
cysM
2891633
2892535
-
Intergenic
-917
NZ_LR595896.1
2894457
2894469
CCCGCG
12
+
2
CGCCCG
rfaE1
2894315
2895238
-
Genic
-142
NZ_LR595896.1
2894900
2894912
AGC
12
-
4
TGC
rfaE1
2894315
2895238
-
Genic
-585
NZ_LR595896.1
2895125
2895137
ACGGGC
12
+
2
ACGGGC
rfaE1
2894315
2895238
-
Genic
-810
NZ_LR595896.1
2895445
2895457
ACGATG
12
+
2
TGACGA
UKMR15_RS12585
2895270
2896670
-
Genic
-175
NZ_LR595896.1
2898099
2898111
ATCCGC
12
+
2
CATCCG
UKMR15_RS12595
2898013
2898306
-
Genic
-86
NZ_LR595896.1
2898174
2898186
AGGATC
12
+
2
GATCAG
UKMR15_RS12595
2898013
2898306
-
Genic
-161
NZ_LR595896.1
2899572
2899585
AAGTCG
13
-
2
GACTTC
rpsA
2898877
2900589
-
Genic
-695
NZ_LR595896.1
2900376
2900388
AACCTC
12
+
2
AACCTC
rpsA
2898877
2900589
-
Genic
-1499
NZ_LR595896.1
2901229
2901241
ACGCCG
12
-
2
GCGTCG
UKMR15_RS12610
2900734
2901420
-
Genic
-495
NZ_LR595896.1
2901449
2901461
AGCGCG
12
+
2
CGCGAG
aroA
2901441
2903702
-
Genic
-8
NZ_LR595896.1
2902726
2902738
AGATCG
12
+
2
CGAGAT
aroA
2901441
2903702
-
Genic
-1285
NZ_LR595896.1
2903618
2903632
AGCGCG
14
+
2
CGCGAG
aroA
2901441
2903702
-
Genic
-2177
NZ_LR595896.1
2904027
2904040
ACATCG
13
-
2
TCGATG
pheA
2903928
2905010
-
Genic
-99
NZ_LR595896.1
2905571
2905585
AGATCG
14
-
2
TCTCGA
serC
2905045
2906127
-
Genic
-526
NZ_LR595896.1
2906416
2906428
ACCTGG
12
+
2
CCTGGA
UKMR15_RS12630
2906301
2906897
-
Genic
-115
NZ_LR595896.1
2906618
2906630
AAGCAG
12
-
2
CTGCTT
UKMR15_RS12630
2906301
2906897
-
Genic
-317
NZ_LR595896.1
2908202
2908214
AGGCGC
12
-
2
CCTGCG
gyrA
2906998
2909598
-
Genic
-1204
NZ_LR595896.1
2908880
2908894
CCCGCG
14
+
2
CGCGCC
gyrA
2906998
2909598
-
Genic
-1882
NZ_LR595896.1
2910294
2910306
AACGCC
12
+
2
CGCCAA
UKMR15_RS12640
2910107
2910781
+
Genic
-187