Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 4376 to 4400 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2910330
2910345
ACCGGC
15
+
2
GGCACC
UKMR15_RS12640
2910107
2910781
+
Genic
-223
NZ_LR595896.1
2910409
2910421
AAGTCG
12
-
2
TTCGAC
UKMR15_RS12640
2910107
2910781
+
Genic
-302
NZ_LR595896.1
2910631
2910643
AAGGGC
12
+
2
GGCAAG
UKMR15_RS12640
2910107
2910781
+
Genic
-524
NZ_LR595896.1
2911070
2911083
ACGCGC
13
+
2
ACGCGC
UKMR15_RS12645
2910950
2911648
+
Genic
-120
NZ_LR595896.1
2912811
2912823
AAAAAG
12
-
2
TTTTTC
ssrA
2912406
2912775
+
Intergenic
-405
NZ_LR595896.1
2913293
2913305
ACGAGC
12
-
2
GCTCGT
UKMR15_RS12660
2913091
2913735
+
Genic
-202
NZ_LR595896.1
2913471
2913484
ATCGCG
13
+
2
GCGATC
UKMR15_RS12660
2913091
2913735
+
Genic
-380
NZ_LR595896.1
2913601
2913613
ATCGGC
12
+
2
GCATCG
UKMR15_RS12660
2913091
2913735
+
Genic
-510
NZ_LR595896.1
2913901
2913913
ATGCGC
12
+
2
GCGCAT
UKMR15_RS12665
2913916
2914179
-
Intergenic
3
NZ_LR595896.1
2915792
2915804
ACGCGC
12
+
2
CGCGCA
UKMR15_RS12675
2915518
2915991
+
Genic
-274
NZ_LR595896.1
2916382
2916396
AGCGCG
14
-
2
CGCGCT
UKMR15_RS12680
2915988
2917571
+
Genic
-394
NZ_LR595896.1
2916436
2916448
CCCGCG
12
-
2
GCGCGG
UKMR15_RS12680
2915988
2917571
+
Genic
-448
NZ_LR595896.1
2916493
2916506
CCGCGG
13
+
2
GGCCGC
UKMR15_RS12680
2915988
2917571
+
Genic
-505
NZ_LR595896.1
2916701
2916713
CG
12
+
6
CG
UKMR15_RS12680
2915988
2917571
+
Genic
-713
NZ_LR595896.1
2916946
2916959
CCGCG
13
-
2
GCGCG
UKMR15_RS12680
2915988
2917571
+
Genic
-958
NZ_LR595896.1
2919494
2919506
AGCCCG
12
+
2
AGCCCG
fdhF
2917568
2920522
+
Genic
-1926
NZ_LR595896.1
2920009
2920021
AAGGGC
12
+
2
GGCAAG
fdhF
2917568
2920522
+
Genic
-2441
NZ_LR595896.1
2920864
2920878
ACGCC
14
-
2
GGCGT
UKMR15_RS12690
2920530
2920790
+
Intergenic
-334
NZ_LR595896.1
2921102
2921114
CCCGCG
12
+
2
CGCCCG
UKMR15_RS12695
2921131
2922777
-
Intergenic
17
NZ_LR595896.1
2921423
2921435
ACGAGC
12
+
2
CGAGCA
UKMR15_RS12695
2921131
2922777
-
Genic
-292
NZ_LR595896.1
2923026
2923040
ATCGGC
14
-
2
GCCGAT
UKMR15_RS12700
2922931
2924775
+
Genic
-95
NZ_LR595896.1
2923314
2923326
AGCGCG
12
-
2
GCGCTC
UKMR15_RS12700
2922931
2924775
+
Genic
-383
NZ_LR595896.1
2923593
2923605
AGGCGC
12
+
2
GCGCAG
UKMR15_RS12700
2922931
2924775
+
Genic
-662
NZ_LR595896.1
2923619
2923631
AGCGCG
12
-
2
CGCGCT
UKMR15_RS12700
2922931
2924775
+
Genic
-688
NZ_LR595896.1
2924063
2924076
CG
13
+
6
CG
UKMR15_RS12700
2922931
2924775
+
Genic
-1132