Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 4426 to 4450 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2938072
2938084
CCCCGG
12
-
2
GGGCCG
UKMR15_RS12755
2937706
2938419
-
Genic
-366
NZ_LR595896.1
2938285
2938297
ACGCG
12
-
2
CGCGT
UKMR15_RS12755
2937706
2938419
-
Genic
-579
NZ_LR595896.1
2938385
2938398
CCGCG
13
+
2
GCGCC
UKMR15_RS12755
2937706
2938419
-
Genic
-679
NZ_LR595896.1
2940236
2940249
AGGCCG
13
+
2
CCGAGG
pepN
2938640
2941342
+
Genic
-1596
NZ_LR595896.1
2940250
2940262
AACGTG
12
-
2
ACGTTC
pepN
2938640
2941342
+
Genic
-1610
NZ_LR595896.1
2941865
2941877
ACGCGG
12
-
2
CGTCCG
metE
2941690
2943984
-
Genic
-175
NZ_LR595896.1
2942230
2942243
AGCGCG
13
+
2
AGCGCG
metE
2941690
2943984
-
Genic
-540
NZ_LR595896.1
2942681
2942693
ACG
12
-
4
TCG
metE
2941690
2943984
-
Genic
-991
NZ_LR595896.1
2942761
2942774
ACGCCG
13
-
2
GCGTCG
metE
2941690
2943984
-
Genic
-1071
NZ_LR595896.1
2944306
2944318
AGCGCG
12
-
2
GCTCGC
UKMR15_RS12775
2944101
2945033
+
Genic
-205
NZ_LR595896.1
2946943
2946956
CCGGCG
13
+
2
CGCCGG
UKMR15_RS12790
2947057
2947533
+
Intergenic
101
NZ_LR595896.1
2947677
2947689
ACGCG
12
+
2
GCGAC
UKMR15_RS12795
2947789
2948004
-
Intergenic
100
NZ_LR595896.1
2948280
2948293
ACCGCG
13
-
2
GTCGCG
UKMR15_RS12795
2947789
2948004
-
Intergenic
-491
NZ_LR595896.1
2949604
2949616
AAGCGG
12
-
2
CCGCTT
UKMR15_RS12805
2949241
2949738
-
Genic
-363
NZ_LR595896.1
2950232
2950244
ACCGCC
12
+
2
CACCGC
UKMR15_RS12810
2949735
2950985
-
Genic
-497
NZ_LR595896.1
2951367
2951379
ACGTCG
12
+
2
CGTCGA
UKMR15_RS12815
2950994
2953330
-
Genic
-373
NZ_LR595896.1
2951780
2951792
ACCGCG
12
-
2
GTCGCG
UKMR15_RS12815
2950994
2953330
-
Genic
-786
NZ_LR595896.1
2952213
2952227
AGCCCG
14
+
2
CGAGCC
UKMR15_RS12815
2950994
2953330
-
Genic
-1219
NZ_LR595896.1
2952699
2952711
ACGGCT
12
-
2
AGCCGT
UKMR15_RS12815
2950994
2953330
-
Genic
-1705
NZ_LR595896.1
2953964
2953976
AAACGC
12
+
2
AACGCA
UKMR15_RS12825
2954072
2954218
+
Intergenic
96
NZ_LR595896.1
2955410
2955423
AATCGG
13
+
2
CGGAAT
UKMR15_RS12840
2955381
2956526
-
Genic
-29
NZ_LR595896.1
2955865
2955879
ACGGCG
14
-
2
CGTCGC
UKMR15_RS12840
2955381
2956526
-
Genic
-484
NZ_LR595896.1
2956504
2956516
CCG
12
-
4
GCG
UKMR15_RS12840
2955381
2956526
-
Genic
-1123
NZ_LR595896.1
2956613
2956625
AAAACC
12
+
2
AAAACC
UKMR15_RS12845
2956672
2956875
-
Intergenic
47
NZ_LR595896.1
2956892
2956906
AAAAAT
14
+
2
AAATAA
UKMR15_RS12845
2956672
2956875
-
Intergenic
-220