Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 4476 to 4500 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2974668
2974681
CCCGCG
13
+
2
CCCGCG
UKMR15_RS12950
2973352
2975013
+
Genic
-1316
NZ_LR595896.1
2974818
2974831
CCCGCG
13
-
2
GGCGCG
UKMR15_RS12950
2973352
2975013
+
Genic
-1466
NZ_LR595896.1
2975147
2975160
ACCCAG
13
+
2
GACCCA
UKMR15_RS12955
2975130
2975549
-
Genic
-17
NZ_LR595896.1
2975341
2975354
ACG
13
+
4
CGA
UKMR15_RS12955
2975130
2975549
-
Genic
-211
NZ_LR595896.1
2975449
2975463
CCCGCG
14
+
2
CGCCCG
UKMR15_RS12955
2975130
2975549
-
Genic
-319
NZ_LR595896.1
2975629
2975641
CCG
12
-
4
GCG
minE
2975671
2975925
-
Intergenic
30
NZ_LR595896.1
2975814
2975827
CCCG
13
-
3
GGCG
minE
2975671
2975925
-
Genic
-143
NZ_LR595896.1
2976779
2976791
ACCG
12
+
3
GACC
minC
2976812
2977624
-
Intergenic
21
NZ_LR595896.1
2977160
2977173
CCCGCG
13
-
2
GCGGGC
minC
2976812
2977624
-
Genic
-348
NZ_LR595896.1
2977712
2977725
CCCG
13
+
3
CCCG
UKMR15_RS12975
2977778
2978275
-
Intergenic
53
NZ_LR595896.1
2979045
2979058
AACGGC
13
+
2
AACGGC
UKMR15_RS12980
2978342
2979034
+
Intergenic
-703
NZ_LR595896.1
2980716
2980729
ACACGC
13
-
2
TGCGTG
serS
2979969
2981270
-
Genic
-747
NZ_LR595896.1
2981701
2981713
ACGGCG
12
+
2
GACGGC
UKMR15_RS13000
2981428
2981694
+
Intergenic
-273
NZ_LR595896.1
2982068
2982082
AGCGCG
14
+
2
GCGCGA
UKMR15_RS13005
2981734
2983044
-
Genic
-334
NZ_LR595896.1
2982093
2982105
AGCCG
12
+
2
CGAGC
UKMR15_RS13005
2981734
2983044
-
Genic
-359
NZ_LR595896.1
2982341
2982353
ACGATG
12
-
2
TCATCG
UKMR15_RS13005
2981734
2983044
-
Genic
-607
NZ_LR595896.1
2983129
2983141
CCCGCG
12
+
2
CCGCGC
UKMR15_RS13005
2981734
2983044
-
Intergenic
-1395
NZ_LR595896.1
2983385
2983397
ATCGGC
12
-
2
GCCGAT
lolA
2983233
2983955
-
Genic
-152
NZ_LR595896.1
2983903
2983927
AGCCGG
24
+
4
AGCCGG
lolA
2983233
2983955
-
Genic
-670
NZ_LR595896.1
2984104
2984116
CCGCG
12
+
2
GCCGC
UKMR15_RS13015
2984013
2986319
-
Genic
-91
NZ_LR595896.1
2985098
2985111
AGGCCG
13
+
2
GCCGAG
UKMR15_RS13015
2984013
2986319
-
Genic
-1085
NZ_LR595896.1
2985939
2985952
ACGAGC
13
+
2
AGCACG
UKMR15_RS13015
2984013
2986319
-
Genic
-1926
NZ_LR595896.1
2986855
2986867
ACGCGC
12
+
2
CGCGCA
trxB
2986647
2987609
+
Genic
-208
NZ_LR595896.1
2987225
2987237
AAAAGG
12
+
2
AAGGAA
trxB
2986647
2987609
+
Genic
-578
NZ_LR595896.1
2987618
2987630
CCGCG
12
-
2
GCGGC
trxB
2986647
2987609
+
Intergenic
-971