Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 4501 to 4525 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2987956
2987969
AGGCGC
13
+
2
GGCGCA
UKMR15_RS13025
2987775
2988512
+
Genic
-181
NZ_LR595896.1
2987990
2988002
ACGCCG
12
+
2
GCCGAC
UKMR15_RS13025
2987775
2988512
+
Genic
-215
NZ_LR595896.1
2988070
2988084
CCCGCG
14
+
2
CGCGCC
UKMR15_RS13025
2987775
2988512
+
Genic
-295
NZ_LR595896.1
2988484
2988496
ACGAGC
12
-
2
CGTGCT
UKMR15_RS13025
2987775
2988512
+
Genic
-709
NZ_LR595896.1
2989464
2989477
AGCCGC
13
-
2
GCTGCG
ugpC
2989391
2990509
-
Genic
-73
NZ_LR595896.1
2990035
2990047
AACAGG
12
+
2
GAACAG
ugpC
2989391
2990509
-
Genic
-644
NZ_LR595896.1
2990169
2990181
AAGCAG
12
-
2
TCTGCT
ugpC
2989391
2990509
-
Genic
-778
NZ_LR595896.1
2990426
2990442
ACATCG
16
-
2
TCGATG
ugpC
2989391
2990509
-
Genic
-1035
NZ_LR595896.1
2991010
2991023
ACGAGC
13
+
2
GCACGA
UKMR15_RS13040
2990610
2991467
-
Genic
-400
NZ_LR595896.1
2991548
2991560
ACGCCG
12
+
2
CGCCGA
UKMR15_RS13045
2991457
2992395
-
Genic
-91
NZ_LR595896.1
2991941
2991954
AGGCCG
13
+
2
CGAGGC
UKMR15_RS13045
2991457
2992395
-
Genic
-484
NZ_LR595896.1
2995218
2995230
AGATCG
12
+
2
TCGAGA
zwf
2994258
2995727
+
Genic
-960
NZ_LR595896.1
2995458
2995470
ACCTCG
12
+
2
ACCTCG
zwf
2994258
2995727
+
Genic
-1200
NZ_LR595896.1
2995907
2995919
CG
12
+
6
CG
pgl
2995815
2996495
+
Genic
-92
NZ_LR595896.1
2996405
2996420
CCGCGG
15
+
2
GCGGCC
pgl
2995815
2996495
+
Genic
-590
NZ_LR595896.1
2996694
2996710
ATCGCG
16
+
2
GCGATC
UKMR15_RS13065
2996473
2998398
+
Genic
-221
NZ_LR595896.1
2997198
2997211
AGCGCG
13
-
2
GCGCTC
UKMR15_RS13065
2996473
2998398
+
Genic
-725
NZ_LR595896.1
2998260
2998275
CCGCG
15
+
3
CGCCG
UKMR15_RS13065
2996473
2998398
+
Genic
-1787
NZ_LR595896.1
2998406
2998418
ACGCGC
12
+
2
GCGCAC
UKMR15_RS13065
2996473
2998398
+
Intergenic
-1933
NZ_LR595896.1
2999057
2999072
ACGTCG
15
+
2
TCGACG
UKMR15_RS13070
2998874
2999674
+
Genic
-183
NZ_LR595896.1
3000033
3000048
ACGCTC
15
+
2
TCACGC
UKMR15_RS13075
2999760
3000419
+
Genic
-273
NZ_LR595896.1
3000307
3000320
AGCGGC
13
-
2
GCCGCT
UKMR15_RS13075
2999760
3000419
+
Genic
-547
NZ_LR595896.1
3000570
3000582
AGCCGG
12
-
2
TCCGGC
UKMR15_RS13080
3000466
3001191
+
Genic
-104
NZ_LR595896.1
3001136
3001149
CCGCG
13
+
2
CGCCG
UKMR15_RS13080
3000466
3001191
+
Genic
-670
NZ_LR595896.1
3001234
3001247
CCCCG
13
+
2
CCGCC
UKMR15_RS13085
3001262
3002281
+
Intergenic
15