Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 4551 to 4575 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3016873
3016887
AGCGCG
14
-
2
GCGCTC
UKMR15_RS13155
3016703
3017377
+
Genic
-170
NZ_LR595896.1
3017258
3017271
CCCGCG
13
-
2
GCGCGG
UKMR15_RS13155
3016703
3017377
+
Genic
-555
NZ_LR595896.1
3018238
3018250
CCG
12
+
4
CCG
UKMR15_RS13160
3017824
3018807
-
Genic
-414
NZ_LR595896.1
3019377
3019390
AATTGC
13
+
2
AATTGC
UKMR15_RS13165
3018969
3019262
-
Intergenic
-408
NZ_LR595896.1
3019398
3019410
CCGCG
12
-
2
CGCGG
UKMR15_RS13165
3018969
3019262
-
Intergenic
-429
NZ_LR595896.1
3019498
3019513
CCCG
15
+
3
CCGC
UKMR15_RS13170
3019686
3020822
+
Intergenic
173
NZ_LR595896.1
3019780
3019792
ACGGCG
12
-
2
CGTCGC
UKMR15_RS13170
3019686
3020822
+
Genic
-94
NZ_LR595896.1
3020030
3020043
CCGCGG
13
+
2
GGCCGC
UKMR15_RS13170
3019686
3020822
+
Genic
-344
NZ_LR595896.1
3020703
3020715
AGCGCG
12
-
2
TCGCGC
UKMR15_RS13170
3019686
3020822
+
Genic
-1017
NZ_LR595896.1
3020873
3020885
ACTGG
12
+
2
GACTG
UKMR15_RS13175
3020905
3021468
+
Intergenic
20
NZ_LR595896.1
3021502
3021514
CCGCG
12
-
2
GCGGC
UKMR15_RS13180
3021492
3021848
-
Genic
-10
NZ_LR595896.1
3022431
3022444
CCGCG
13
-
2
GCGCG
crcB
3021872
3022258
-
Intergenic
-559
NZ_LR595896.1
3023632
3023644
AGCGGC
12
+
2
AGCGGC
UKMR15_RS13190
3022868
3024088
+
Genic
-764
NZ_LR595896.1
3023639
3023651
CCG
12
-
4
GCG
UKMR15_RS13190
3022868
3024088
+
Genic
-771
NZ_LR595896.1
3023852
3023864
ATCGCG
12
+
2
TCGCGA
UKMR15_RS13190
3022868
3024088
+
Genic
-984
NZ_LR595896.1
3024389
3024401
AGCGGG
12
-
2
CGCTCC
UKMR15_RS13195
3024356
3025084
-
Genic
-33
NZ_LR595896.1
3025165
3025178
CCCGCG
13
-
2
GCGGGC
UKMR15_RS13195
3024356
3025084
-
Intergenic
-809
NZ_LR595896.1
3025184
3025205
AATCCG
21
-
3
CGGATT
UKMR15_RS13195
3024356
3025084
-
Intergenic
-828
NZ_LR595896.1
3026061
3026074
ATCGGC
13
-
2
CGATGC
UKMR15_RS13200
3025328
3026578
-
Genic
-733
NZ_LR595896.1
3026071
3026083
CCCGCG
12
+
2
GCCCGC
UKMR15_RS13200
3025328
3026578
-
Genic
-743
NZ_LR595896.1
3027012
3027024
ACG
12
+
4
ACG
trmB
3026973
3027770
+
Genic
-39
NZ_LR595896.1
3027049
3027062
CCGCG
13
+
2
CCGCG
trmB
3026973
3027770
+
Genic
-76
NZ_LR595896.1
3027071
3027084
ACG
13
+
4
GAC
trmB
3026973
3027770
+
Genic
-98
NZ_LR595896.1
3027666
3027678
CCCCG
12
+
2
CGCCC
trmB
3026973
3027770
+
Genic
-693
NZ_LR595896.1
3027838
3027851
CCG
13
-
4
CGG
trmB
3026973
3027770
+
Intergenic
-865