Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 4526 to 4550 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3001543
3001555
AGGCCG
12
-
2
CTCGGC
UKMR15_RS13085
3001262
3002281
+
Genic
-281
NZ_LR595896.1
3001886
3001898
AGCGCG
12
-
2
TCGCGC
UKMR15_RS13085
3001262
3002281
+
Genic
-624
NZ_LR595896.1
3002547
3002560
CCCGCG
13
+
2
CCGCGC
UKMR15_RS13090
3002278
3002745
+
Genic
-269
NZ_LR595896.1
3002833
3002845
CCGCG
12
+
2
GCGCC
UKMR15_RS13095
3002855
3004090
-
Intergenic
10
NZ_LR595896.1
3005332
3005344
AAGCGC
12
+
2
GCAAGC
UKMR15_RS13105
3004903
3005361
+
Genic
-429
NZ_LR595896.1
3005396
3005408
ACGGG
12
-
2
CGTCC
hemL
3005380
3007080
+
Genic
-16
NZ_LR595896.1
3005654
3005666
CCCCG
12
+
2
CCGCC
hemL
3005380
3007080
+
Genic
-274
NZ_LR595896.1
3005657
3005669
CCCCCG
12
+
2
CCCCGC
hemL
3005380
3007080
+
Genic
-277
NZ_LR595896.1
3006700
3006715
ACCGCG
15
-
2
CGGTCG
hemL
3005380
3007080
+
Genic
-1320
NZ_LR595896.1
3007143
3007158
AGCGCG
15
-
2
CGCGCT
ribD
3007109
3008245
+
Genic
-34
NZ_LR595896.1
3007290
3007304
CG
14
+
7
CG
ribD
3007109
3008245
+
Genic
-181
NZ_LR595896.1
3007674
3007686
CG
12
+
6
GC
ribD
3007109
3008245
+
Genic
-565
NZ_LR595896.1
3009262
3009274
CCGCG
12
+
2
CGCCG
UKMR15_RS13125
3009337
3010473
+
Intergenic
63
NZ_LR595896.1
3009507
3009520
ACGCTC
13
+
2
CTCACG
UKMR15_RS13125
3009337
3010473
+
Genic
-170
NZ_LR595896.1
3010263
3010276
AAGGAG
13
+
2
GAGAAG
UKMR15_RS13125
3009337
3010473
+
Genic
-926
NZ_LR595896.1
3010343
3010356
ACGCCG
13
-
2
CGTCGG
UKMR15_RS13125
3009337
3010473
+
Genic
-1006
NZ_LR595896.1
3011047
3011061
AAGACG
14
+
2
GACGAA
UKMR15_RS13130
3010553
3011074
+
Genic
-494
NZ_LR595896.1
3011490
3011505
CCGCG
15
-
3
GCGCG
nusB
3011071
3011508
+
Genic
-419
NZ_LR595896.1
3012455
3012467
CCGCG
12
+
2
CGCGC
UKMR15_RS13140
3011573
3012766
+
Genic
-882
NZ_LR595896.1
3012638
3012650
ACGAGC
12
-
2
TCGTGC
UKMR15_RS13140
3011573
3012766
+
Genic
-1065
NZ_LR595896.1
3013018
3013152
ACTCGG
134
+
22
GACTCG
UKMR15_RS13140
3011573
3012766
+
Intergenic
-1445
NZ_LR595896.1
3014394
3014410
ACCGCG
16
+
2
CGCGAC
UKMR15_RS13145
3013411
3014523
-
Genic
-983
NZ_LR595896.1
3014940
3014952
AATCGG
12
+
2
TCGGAA
UKMR15_RS13150
3015103
3016662
+
Intergenic
151
NZ_LR595896.1
3015754
3015766
ACGGCG
12
-
2
CCGTCG
UKMR15_RS13150
3015103
3016662
+
Genic
-651
NZ_LR595896.1
3015962
3015974
CCCGCG
12
+
2
CGCGCC
UKMR15_RS13150
3015103
3016662
+
Genic
-859