Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 4401 to 4425 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2924881
2924894
AGCGCG
13
-
2
GCGCTC
UKMR15_RS12700
2922931
2924775
+
Intergenic
-1950
NZ_LR595896.1
2925062
2925074
CCGCG
12
+
2
CGCGC
UKMR15_RS12705
2925164
2926459
-
Intergenic
90
NZ_LR595896.1
2925841
2925854
AACAGG
13
+
2
CAGGAA
UKMR15_RS12705
2925164
2926459
-
Genic
-677
NZ_LR595896.1
2926279
2926292
ACAGCG
13
+
2
CGACAG
UKMR15_RS12705
2925164
2926459
-
Genic
-1115
NZ_LR595896.1
2926799
2926812
CCGCG
13
+
2
CGCCG
UKMR15_RS12710
2926513
2926737
-
Intergenic
-286
NZ_LR595896.1
2927915
2927927
AGCGCG
12
-
2
TCGCGC
UKMR15_RS12720
2928877
2930253
+
Intergenic
950
NZ_LR595896.1
2927953
2927966
CCCGCG
13
+
2
GCGCCC
UKMR15_RS12720
2928877
2930253
+
Intergenic
911
NZ_LR595896.1
2929030
2929044
CG
14
+
7
CG
UKMR15_RS12720
2928877
2930253
+
Genic
-153
NZ_LR595896.1
2931828
2931840
AGCCCG
12
+
2
CGAGCC
xdhC
2931413
2932435
+
Genic
-415
NZ_LR595896.1
2932336
2932350
ATCGCG
14
+
2
GCGATC
xdhC
2931413
2932435
+
Genic
-923
NZ_LR595896.1
2932346
2932358
ACGGCG
12
-
2
TCGCCG
xdhC
2931413
2932435
+
Genic
-933
NZ_LR595896.1
2932527
2932539
ACATCC
12
+
2
CACATC
UKMR15_RS12735
2932477
2933502
+
Genic
-50
NZ_LR595896.1
2934490
2934502
ACCGCG
12
+
2
CGCGAC
UKMR15_RS12740
2933600
2934976
+
Genic
-890
NZ_LR595896.1
2934672
2934686
AACAGG
14
-
2
GTTCCT
UKMR15_RS12740
2933600
2934976
+
Genic
-1072
NZ_LR595896.1
2934729
2934741
ACGAGC
12
-
2
GCTCGT
UKMR15_RS12740
2933600
2934976
+
Genic
-1129
NZ_LR595896.1
2935254
2935266
CCGGCG
12
+
2
CGCCGG
guaD
2935002
2936312
+
Genic
-252
NZ_LR595896.1
2935565
2935578
ACGGCC
13
+
2
CACGGC
guaD
2935002
2936312
+
Genic
-563
NZ_LR595896.1
2935816
2935829
ACG
13
+
4
CGA
guaD
2935002
2936312
+
Genic
-814
NZ_LR595896.1
2936217
2936230
AGCGCG
13
-
2
TCGCGC
guaD
2935002
2936312
+
Genic
-1215
NZ_LR595896.1
2936324
2936337
CCCCGG
13
-
2
GGCCGG
guaD
2935002
2936312
+
Intergenic
-1322
NZ_LR595896.1
2936365
2936377
CCG
12
+
4
CGC
guaD
2935002
2936312
+
Intergenic
-1363
NZ_LR595896.1
2937012
2937024
AGCGCG
12
-
2
GCGCTC
UKMR15_RS12750
2936800
2937372
+
Genic
-212
NZ_LR595896.1
2937081
2937093
AACGCG
12
+
2
GCGAAC
UKMR15_RS12750
2936800
2937372
+
Genic
-281
NZ_LR595896.1
2937784
2937796
CCCGCG
12
-
2
GGCGCG
UKMR15_RS12755
2937706
2938419
-
Genic
-78
NZ_LR595896.1
2937864
2937876
AGCG
12
+
3
CGAG
UKMR15_RS12755
2937706
2938419
-
Genic
-158