Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 4176 to 4200 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2772600
2772641
ACTGGC
41
+
6
GGCACT
pdxY
2773117
2773980
+
Intergenic
476
NZ_LR595896.1
2772636
2772658
ACCGGC
22
+
3
GGCACC
pdxY
2773117
2773980
+
Intergenic
459
NZ_LR595896.1
2773764
2773777
ACGCCG
13
-
2
GTCGGC
pdxY
2773117
2773980
+
Genic
-647
NZ_LR595896.1
2773898
2773912
AGCTCG
14
+
2
CGAGCT
pdxY
2773117
2773980
+
Genic
-781
NZ_LR595896.1
2774137
2774149
AAGCCG
12
-
2
GCTTCG
pdxY
2773117
2773980
+
Intergenic
-1020
NZ_LR595896.1
2774249
2774262
ACGCCG
13
-
2
CGTCGG
pdxY
2773117
2773980
+
Intergenic
-1132
NZ_LR595896.1
2774339
2774352
CCGCGG
13
+
2
CGCGGC
UKMR15_RS12000
2774626
2776728
+
Intergenic
274
NZ_LR595896.1
2774574
2774586
AGCGGC
12
-
2
GCCGCT
UKMR15_RS12000
2774626
2776728
+
Intergenic
40
NZ_LR595896.1
2776083
2776095
ACCGGC
12
-
2
GTGCCG
UKMR15_RS12000
2774626
2776728
+
Genic
-1457
NZ_LR595896.1
2776818
2776830
CCGCGG
12
+
2
CGGCCG
UKMR15_RS12000
2774626
2776728
+
Intergenic
-2192
NZ_LR595896.1
2777579
2777593
AGGGCG
14
-
2
CCCTCG
UKMR15_RS12005
2777555
2778703
+
Genic
-24
NZ_LR595896.1
2778318
2778332
CCG
14
-
4
CGG
UKMR15_RS12005
2777555
2778703
+
Genic
-763
NZ_LR595896.1
2779591
2779603
CCGCG
12
-
2
GCGGC
UKMR15_RS12010
2778802
2779974
+
Genic
-789
NZ_LR595896.1
2780110
2780127
ACGGCG
17
-
2
CGCCGT
UKMR15_RS12015
2780129
2780590
-
Intergenic
2
NZ_LR595896.1
2780215
2780231
CG
16
+
8
CG
UKMR15_RS12015
2780129
2780590
-
Genic
-86
NZ_LR595896.1
2780526
2780539
AACGCG
13
+
2
ACGCGA
UKMR15_RS12015
2780129
2780590
-
Genic
-397
NZ_LR595896.1
2780896
2780908
CCGCG
12
-
2
GCGGC
UKMR15_RS12020
2780646
2781617
-
Genic
-250
NZ_LR595896.1
2781220
2781232
CCCGCG
12
-
2
GCGCGG
UKMR15_RS12020
2780646
2781617
-
Genic
-574
NZ_LR595896.1
2781741
2781753
CCGCG
12
-
2
CGGCG
UKMR15_RS12020
2780646
2781617
-
Intergenic
-1095
NZ_LR595896.1
2782203
2782215
ACGCGC
12
-
2
GCGCGT
UKMR15_RS12025
2781884
2782948
-
Genic
-319
NZ_LR595896.1
2784110
2784122
AGCCG
12
-
2
GCTCG
UKMR15_RS12030
2783515
2785380
+
Genic
-595
NZ_LR595896.1
2784359
2784372
ACAGCC
13
-
2
GCTGTG
UKMR15_RS12030
2783515
2785380
+
Genic
-844
NZ_LR595896.1
2784553
2784565
AGCGCG
12
-
2
TCGCGC
UKMR15_RS12030
2783515
2785380
+
Genic
-1038
NZ_LR595896.1
2785013
2785026
ATCGCG
13
+
2
GATCGC
UKMR15_RS12030
2783515
2785380
+
Genic
-1498
NZ_LR595896.1
2785311
2785327
CCCGCG
16
+
2
GCGCCC
UKMR15_RS12030
2783515
2785380
+
Genic
-1796