Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3876 to 3900 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2561939
2561952
ACG
13
-
4
TCG
UKMR15_RS11095
2560904
2564050
+
Genic
-1035
NZ_LR595896.1
2563484
2563496
ATCGGC
12
-
2
CGATGC
UKMR15_RS11095
2560904
2564050
+
Genic
-2580
NZ_LR595896.1
2564188
2564200
AGCGCG
12
-
2
CGCTCG
UKMR15_RS11100
2564128
2565348
+
Genic
-60
NZ_LR595896.1
2564996
2565009
AGGGCG
13
-
2
CCTCGC
UKMR15_RS11100
2564128
2565348
+
Genic
-868
NZ_LR595896.1
2565311
2565327
CCGCG
16
-
3
CGGCG
UKMR15_RS11100
2564128
2565348
+
Genic
-1183
NZ_LR595896.1
2566637
2566650
AACCTG
13
-
2
GTTCAG
UKMR15_RS11105
2565387
2567219
-
Genic
-1250
NZ_LR595896.1
2566665
2566677
CCGGCG
12
+
2
GCGCCG
UKMR15_RS11105
2565387
2567219
-
Genic
-1278
NZ_LR595896.1
2567736
2567749
CG
13
+
6
CG
UKMR15_RS11110
2567413
2568459
-
Genic
-323
NZ_LR595896.1
2569468
2569480
AAAAAG
12
+
2
AGAAAA
UKMR15_RS11120
2569524
2569617
-
Intergenic
44
NZ_LR595896.1
2570027
2570039
AACGTG
12
+
2
CGTGAA
UKMR15_RS11125
2569731
2570981
-
Genic
-296
NZ_LR595896.1
2570497
2570513
ACCGCG
16
+
2
CCGCGA
UKMR15_RS11125
2569731
2570981
-
Genic
-766
NZ_LR595896.1
2571604
2571616
ACGAGC
12
-
2
TCGTGC
tilS
2571322
2572800
-
Genic
-282
NZ_LR595896.1
2572228
2572240
AGCGC
12
+
2
CAGCG
tilS
2571322
2572800
-
Genic
-906
NZ_LR595896.1
2572701
2572715
ATCGCG
14
+
2
CGCGAT
tilS
2571322
2572800
-
Genic
-1379
NZ_LR595896.1
2574559
2574571
ACGGGC
12
+
2
GCACGG
UKMR15_RS11145
2573919
2574857
-
Genic
-640
NZ_LR595896.1
2575211
2575225
ACGGCG
14
+
2
ACGGCG
UKMR15_RS11150
2574905
2576302
-
Genic
-306
NZ_LR595896.1
2575572
2575584
AACGAG
12
-
2
TCTCGT
UKMR15_RS11150
2574905
2576302
-
Genic
-667
NZ_LR595896.1
2576598
2576611
AGCGCG
13
-
2
CGCGCT
UKMR15_RS11155
2576534
2577256
+
Genic
-64
NZ_LR595896.1
2577115
2577127
CCCCGG
12
+
2
CCGGCC
UKMR15_RS11155
2576534
2577256
+
Genic
-581
NZ_LR595896.1
2579495
2579507
CCG
12
-
4
GGC
cysE
2579621
2580406
-
Intergenic
114
NZ_LR595896.1
2579977
2579990
CCCGCG
13
+
2
CGCGCC
cysE
2579621
2580406
-
Genic
-356
NZ_LR595896.1
2580252
2580264
AGCGCC
12
+
2
GCCAGC
cysE
2579621
2580406
-
Genic
-631
NZ_LR595896.1
2580522
2580534
ACGCGC
12
+
2
CGCGCA
UKMR15_RS11180
2580597
2581526
-
Intergenic
63
NZ_LR595896.1
2580653
2580686
AACGGC
33
-
5
GCCGTT
UKMR15_RS11180
2580597
2581526
-
Genic
-56
NZ_LR595896.1
2582207
2582219
CCGCGG
12
+
2
CGCGGC
UKMR15_RS11190
2581827
2582630
+
Genic
-380