Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3826 to 3850 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2532337
2532350
AGCCCC
13
+
2
CCCAGC
UKMR15_RS11005
2532090
2532908
-
Genic
-247
NZ_LR595896.1
2532638
2532650
ACTGCG
12
-
2
GTCGCA
UKMR15_RS11005
2532090
2532908
-
Genic
-548
NZ_LR595896.1
2532802
2532814
ACGATC
12
+
2
TCACGA
UKMR15_RS11005
2532090
2532908
-
Genic
-712
NZ_LR595896.1
2533503
2533516
ACGCGC
13
-
2
TGCGCG
UKMR15_RS11010
2532999
2534093
-
Genic
-504
NZ_LR595896.1
2533925
2533940
AGGCGC
15
-
2
CGCCTG
UKMR15_RS11010
2532999
2534093
-
Genic
-926
NZ_LR595896.1
2534605
2534617
ATCGCG
12
+
2
ATCGCG
UKMR15_RS11015
2534134
2535264
-
Genic
-471
NZ_LR595896.1
2534953
2534967
ACGAGC
14
+
2
AGCACG
UKMR15_RS11015
2534134
2535264
-
Genic
-819
NZ_LR595896.1
2535045
2535057
ACGTCG
12
+
2
CGACGT
UKMR15_RS11015
2534134
2535264
-
Genic
-911
NZ_LR595896.1
2535315
2535328
CCGCG
13
-
2
CGCGG
UKMR15_RS11020
2535313
2536455
-
Genic
-2
NZ_LR595896.1
2536065
2536077
AGCGCC
12
+
2
CAGCGC
UKMR15_RS11020
2535313
2536455
-
Genic
-752
NZ_LR595896.1
2536082
2536094
AGCGGC
12
+
2
GCAGCG
UKMR15_RS11020
2535313
2536455
-
Genic
-769
NZ_LR595896.1
2537750
2537762
ACGGCG
12
-
2
TCGCCG
UKMR15_RS11030
2537360
2538184
-
Genic
-390
NZ_LR595896.1
2538875
2538887
AAGATG
12
+
2
GAAGAT
UKMR15_RS11035
2538204
2539238
-
Genic
-671
NZ_LR595896.1
2539071
2539083
ACGGCG
12
-
2
TCGCCG
UKMR15_RS11035
2538204
2539238
-
Genic
-867
NZ_LR595896.1
2539546
2539558
ACGACT
12
-
2
GTCGTA
UKMR15_RS11040
2539286
2540065
-
Genic
-260
NZ_LR595896.1
2539789
2539803
AGCATC
14
+
2
CATCAG
UKMR15_RS11040
2539286
2540065
-
Genic
-503
NZ_LR595896.1
2540094
2540106
CG
12
+
6
CG
UKMR15_RS11045
2540085
2540933
-
Genic
-9
NZ_LR595896.1
2542655
2542668
ATCGC
13
-
2
ATGCG
UKMR15_RS11055
2541886
2542683
-
Genic
-769
NZ_LR595896.1
2543413
2543425
ACGGCG
12
-
2
TCGCCG
UKMR15_RS11060
2542680
2551619
-
Genic
-733
NZ_LR595896.1
2545627
2545639
AGCTCG
12
+
2
CGAGCT
UKMR15_RS11060
2542680
2551619
-
Genic
-2947
NZ_LR595896.1
2545708
2545722
ACGTCG
14
+
2
CGTCGA
UKMR15_RS11060
2542680
2551619
-
Genic
-3028
NZ_LR595896.1
2546064
2546076
AGCGGC
12
-
2
TGCCGC
UKMR15_RS11060
2542680
2551619
-
Genic
-3384
NZ_LR595896.1
2546121
2546134
CCGG
13
+
3
GGCC
UKMR15_RS11060
2542680
2551619
-
Genic
-3441
NZ_LR595896.1
2547117
2547130
CCCGCG
13
-
2
GGCGCG
UKMR15_RS11060
2542680
2551619
-
Genic
-4437
NZ_LR595896.1
2547763
2547776
CCGCG
13
+
2
CGCCG
UKMR15_RS11060
2542680
2551619
-
Genic
-5083