Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3776 to 3800 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2502442
2502458
ACCGCC
16
+
2
CCGCCA
UKMR15_RS10860
2502153
2502560
-
Genic
-289
NZ_LR595896.1
2502752
2502764
AGCGCG
12
+
2
GCGAGC
rraA
2502608
2503105
-
Genic
-144
NZ_LR595896.1
2503322
2503334
ACGCGC
12
-
2
TGCGCG
UKMR15_RS10870
2503235
2504098
+
Genic
-87
NZ_LR595896.1
2503712
2503724
ATCGGC
12
-
2
TGCCGA
UKMR15_RS10870
2503235
2504098
+
Genic
-477
NZ_LR595896.1
2503959
2503972
AGAGCC
13
+
2
CCAGAG
UKMR15_RS10870
2503235
2504098
+
Genic
-724
NZ_LR595896.1
2505243
2505255
AGCGGC
12
+
2
GCGGCA
UKMR15_RS10875
2504702
2505169
-
Intergenic
-541
NZ_LR595896.1
2507458
2507470
AGCCCG
12
+
2
CGAGCC
UKMR15_RS10905
2506254
2507663
-
Genic
-1204
NZ_LR595896.1
2507796
2507808
ACGCG
12
-
2
CGTCG
UKMR15_RS10905
2506254
2507663
-
Intergenic
-1542
NZ_LR595896.1
2507933
2507950
ACGCGC
17
+
2
CGCACG
UKMR15_RS10905
2506254
2507663
-
Intergenic
-1679
NZ_LR595896.1
2507945
2507970
ACTCGC
25
+
4
CGCACT
UKMR15_RS10910
2508221
2509264
+
Intergenic
251
NZ_LR595896.1
2508494
2508507
CCGCG
13
-
2
GCGGC
UKMR15_RS10910
2508221
2509264
+
Genic
-273
NZ_LR595896.1
2509314
2509326
ACCGTG
12
-
2
CGGTCA
UKMR15_RS10910
2508221
2509264
+
Intergenic
-1093
NZ_LR595896.1
2509329
2509341
CCGCG
12
+
2
CGCGC
UKMR15_RS10910
2508221
2509264
+
Intergenic
-1108
NZ_LR595896.1
2509440
2509454
AGCGCG
14
-
2
CGCTCG
UKMR15_RS10915
2509430
2510134
-
Genic
-10
NZ_LR595896.1
2510514
2510528
ACGAGC
14
+
2
CGAGCA
UKMR15_RS10920
2510270
2511919
-
Genic
-244
NZ_LR595896.1
2510551
2510564
ATCGCG
13
+
2
CGCGAT
UKMR15_RS10920
2510270
2511919
-
Genic
-281
NZ_LR595896.1
2510564
2510577
AGCGCC
13
-
2
CGCTGG
UKMR15_RS10920
2510270
2511919
-
Genic
-294
NZ_LR595896.1
2511485
2511497
CG
12
+
6
CG
UKMR15_RS10920
2510270
2511919
-
Genic
-1215
NZ_LR595896.1
2511868
2511882
ACGGCG
14
+
2
CGACGG
UKMR15_RS10920
2510270
2511919
-
Genic
-1598
NZ_LR595896.1
2511884
2511896
CCGGCG
12
+
2
GCGCCG
UKMR15_RS10920
2510270
2511919
-
Genic
-1614
NZ_LR595896.1
2512094
2512106
ACGCCG
12
-
2
TCGGCG
UKMR15_RS10925
2511916
2513013
-
Genic
-178
NZ_LR595896.1
2512966
2512978
CG
12
+
6
CG
UKMR15_RS10925
2511916
2513013
-
Genic
-1050
NZ_LR595896.1
2513168
2513180
AGCCCG
12
+
2
AGCCCG
UKMR15_RS10930
2513015
2514055
-
Genic
-153
NZ_LR595896.1
2515077
2515090
ACGCGC
13
+
2
GCGCAC
UKMR15_RS10935
2514244
2516196
-
Genic
-833
NZ_LR595896.1
2515280
2515292
ACGGCG
12
-
2
CGCCGT
UKMR15_RS10935
2514244
2516196
-
Genic
-1036