Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 4651 to 4675 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3092573
3092585
ACGCGC
12
+
2
ACGCGC
UKMR15_RS13535
3091984
3092991
+
Genic
-589
NZ_LR595896.1
3093537
3093549
ATCGC
12
+
2
CGCAT
UKMR15_RS13540
3093015
3094037
-
Genic
-522
NZ_LR595896.1
3094198
3094210
CCCGGG
12
+
2
GGCCCG
UKMR15_RS13540
3093015
3094037
-
Intergenic
-1183
NZ_LR595896.1
3094343
3094355
ATCGCG
12
+
2
CGCGAT
UKMR15_RS13545
3094528
3095043
-
Intergenic
173
NZ_LR595896.1
3095133
3095146
CCGGCG
13
+
2
GGCGCC
UKMR15_RS13550
3095159
3095983
-
Intergenic
13
NZ_LR595896.1
3095358
3095370
ACG
12
+
4
ACG
UKMR15_RS13550
3095159
3095983
-
Genic
-199
NZ_LR595896.1
3095493
3095508
ATCGGC
15
-
2
CGATGC
UKMR15_RS13550
3095159
3095983
-
Genic
-334
NZ_LR595896.1
3095736
3095748
AACGTG
12
+
2
ACGTGA
UKMR15_RS13550
3095159
3095983
-
Genic
-577
NZ_LR595896.1
3097226
3097238
CCCGCG
12
-
2
CGGGCG
UKMR15_RS13555
3096061
3097314
-
Genic
-1165
NZ_LR595896.1
3097911
3097923
ACGCGG
12
-
2
TCCGCG
UKMR15_RS13560
3097374
3098972
-
Genic
-537
NZ_LR595896.1
3098038
3098050
ACGATC
12
+
2
TCACGA
UKMR15_RS13560
3097374
3098972
-
Genic
-664
NZ_LR595896.1
3099590
3099602
AATCG
12
-
2
CGATT
UKMR15_RS13565
3099705
3100154
-
Intergenic
103
NZ_LR595896.1
3103083
3103097
CCCCCG
14
+
2
CCCGCC
UKMR15_RS13580
3102433
3102960
+
Intergenic
-650
NZ_LR595896.1
3103088
3103100
CCCCG
12
+
2
CCCCG
UKMR15_RS13580
3102433
3102960
+
Intergenic
-655
NZ_LR595896.1
3103349
3103363
AAGCCG
14
-
2
TCGGCT
UKMR15_RS13585
3103310
3103933
+
Genic
-39
NZ_LR595896.1
3103811
3103823
AGCGCG
12
-
2
TCGCGC
UKMR15_RS13585
3103310
3103933
+
Genic
-501
NZ_LR595896.1
3104434
3104447
AAAACG
13
-
2
TTCGTT
UKMR15_RS13595
3104463
3105599
+
Intergenic
16
NZ_LR595896.1
3104721
3104733
AACGAG
12
+
2
ACGAGA
UKMR15_RS13595
3104463
3105599
+
Genic
-258
NZ_LR595896.1
3106503
3106516
AGCGCG
13
-
2
CGCTCG
UKMR15_RS13600
3105729
3107171
+
Genic
-774
NZ_LR595896.1
3106529
3106541
ACCGCG
12
-
2
GTCGCG
UKMR15_RS13600
3105729
3107171
+
Genic
-800
NZ_LR595896.1
3106834
3106848
ACGCCG
14
-
2
CGTCGG
UKMR15_RS13600
3105729
3107171
+
Genic
-1105
NZ_LR595896.1
3108020
3108033
ACAGCG
13
-
2
GTCGCT
UKMR15_RS13605
3107662
3108456
+
Genic
-358
NZ_LR595896.1
3108165
3108177
CCCGCG
12
-
2
GGCGCG
UKMR15_RS13605
3107662
3108456
+
Genic
-503
NZ_LR595896.1
3108192
3108204
AGC
12
-
4
CTG
UKMR15_RS13605
3107662
3108456
+
Genic
-530
NZ_LR595896.1
3109541
3109553
AACCTG
12
-
2
GTTCAG
UKMR15_RS13610
3108789
3110636
-
Genic
-752