Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 4676 to 4700 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3110508
3110520
CCG
12
+
4
CCG
UKMR15_RS13610
3108789
3110636
-
Genic
-1719
NZ_LR595896.1
3110559
3110571
AGCGGC
12
+
2
GCGGCA
UKMR15_RS13610
3108789
3110636
-
Genic
-1770
NZ_LR595896.1
3111687
3111699
ATCGGC
12
-
2
TGCCGA
UKMR15_RS13615
3111242
3113341
-
Genic
-445
NZ_LR595896.1
3112834
3112847
ACGGCG
13
-
2
CGCCGT
UKMR15_RS13615
3111242
3113341
-
Genic
-1592
NZ_LR595896.1
3113912
3113925
CCGCG
13
+
2
CGCGC
UKMR15_RS13620
3113461
3113829
-
Intergenic
-451
NZ_LR595896.1
3113983
3113996
CCGG
13
+
3
GCCG
UKMR15_RS13620
3113461
3113829
-
Intergenic
-522
NZ_LR595896.1
3114142
3114154
CCGG
12
+
3
GCCG
UKMR15_RS13625
3114310
3115731
+
Intergenic
156
NZ_LR595896.1
3114166
3114179
AACGCG
13
+
2
GAACGC
UKMR15_RS13625
3114310
3115731
+
Intergenic
131
NZ_LR595896.1
3114208
3114221
ACGCGC
13
-
2
GTGCGC
UKMR15_RS13625
3114310
3115731
+
Intergenic
89
NZ_LR595896.1
3114235
3114248
CCGCG
13
-
2
CGCGG
UKMR15_RS13625
3114310
3115731
+
Intergenic
62
NZ_LR595896.1
3114326
3114338
CCG
12
+
4
CCG
UKMR15_RS13625
3114310
3115731
+
Genic
-16
NZ_LR595896.1
3114791
3114804
CCCGCG
13
-
2
GGGCGC
UKMR15_RS13625
3114310
3115731
+
Genic
-481
NZ_LR595896.1
3115934
3115946
AGCGCG
12
-
2
TCGCGC
UKMR15_RS13630
3115829
3116467
+
Genic
-105
NZ_LR595896.1
3117148
3117160
CCCGCG
12
+
2
CGCGCC
UKMR15_RS13635
3116541
3117488
+
Genic
-607
NZ_LR595896.1
3117336
3117348
ACG
12
-
4
TCG
UKMR15_RS13635
3116541
3117488
+
Genic
-795
NZ_LR595896.1
3117689
3117701
CCGCG
12
+
2
GCGCC
UKMR15_RS13640
3117571
3118686
-
Genic
-118
NZ_LR595896.1
3118227
3118239
AGGCCG
12
+
2
GCCGAG
UKMR15_RS13640
3117571
3118686
-
Genic
-656
NZ_LR595896.1
3118884
3118896
ACGATC
12
+
2
ACGATC
UKMR15_RS13645
3118683
3119726
-
Genic
-201
NZ_LR595896.1
3118971
3118983
CCCG
12
+
3
CGCC
UKMR15_RS13645
3118683
3119726
-
Genic
-288
NZ_LR595896.1
3120017
3120029
AGC
12
+
4
AGC
UKMR15_RS13650
3119720
3120511
-
Genic
-297
NZ_LR595896.1
3120359
3120373
AGCGC
14
+
2
GCGCA
UKMR15_RS13650
3119720
3120511
-
Genic
-639
NZ_LR595896.1
3120454
3120466
CCCGCG
12
+
2
CGCGCC
UKMR15_RS13650
3119720
3120511
-
Genic
-734
NZ_LR595896.1
3120508
3120524
ATGCCC
16
-
2
CATGGG
UKMR15_RS13650
3119720
3120511
-
Genic
-788
NZ_LR595896.1
3120626
3120638
ACGTCG
12
+
2
TCGACG
UKMR15_RS13655
3120559
3122829
-
Genic
-67
NZ_LR595896.1
3121430
3121443
ACGCGC
13
-
2
GCGTGC
UKMR15_RS13655
3120559
3122829
-
Genic
-871