Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 4726 to 4750 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3138211
3138223
ACGTCG
12
+
2
TCGACG
bluB
3137752
3138411
+
Genic
-459
NZ_LR595896.1
3138548
3138560
AACGGC
12
-
2
TTGCCG
UKMR15_RS13730
3138527
3139696
+
Genic
-21
NZ_LR595896.1
3139623
3139636
AGCGCG
13
-
2
CGCGCT
UKMR15_RS13730
3138527
3139696
+
Genic
-1096
NZ_LR595896.1
3139770
3139787
ATCGGC
17
+
2
GCATCG
UKMR15_RS13735
3139635
3140240
-
Genic
-135
NZ_LR595896.1
3140057
3140069
AGCGCG
12
-
2
GCGCTC
UKMR15_RS13735
3139635
3140240
-
Genic
-422
NZ_LR595896.1
3141391
3141410
AACCG
19
+
3
CGAAC
fahA
3141568
3142875
-
Intergenic
158
NZ_LR595896.1
3144562
3144574
ATCGCG
12
+
2
CGATCG
UKMR15_RS13755
3144225
3145580
-
Genic
-337
NZ_LR595896.1
3144992
3145006
AGCGCG
14
+
2
CGCGAG
UKMR15_RS13755
3144225
3145580
-
Genic
-767
NZ_LR595896.1
3146081
3146093
ACGCG
12
-
2
CGCGT
UKMR15_RS13765
3145850
3147511
-
Genic
-231
NZ_LR595896.1
3146447
3146459
AGCGCG
12
-
2
TCGCGC
UKMR15_RS13765
3145850
3147511
-
Genic
-597
NZ_LR595896.1
3146503
3146515
AAGCTC
12
-
2
GAGCTT
UKMR15_RS13765
3145850
3147511
-
Genic
-653
NZ_LR595896.1
3146839
3146852
AACCAG
13
+
2
GAACCA
UKMR15_RS13765
3145850
3147511
-
Genic
-989
NZ_LR595896.1
3147340
3147353
ACG
13
-
4
GTC
UKMR15_RS13765
3145850
3147511
-
Genic
-1490
NZ_LR595896.1
3148145
3148158
CCGCG
13
+
2
CGCCG
UKMR15_RS13770
3147531
3148487
-
Genic
-614
NZ_LR595896.1
3148641
3148653
ATATCG
12
+
2
CGATAT
UKMR15_RS13775
3148744
3149550
+
Intergenic
91
NZ_LR595896.1
3149551
3149563
CCCGCG
12
-
2
GGGCGC
UKMR15_RS13775
3148744
3149550
+
Intergenic
-807
NZ_LR595896.1
3151111
3151125
CCGCG
14
+
2
CGCGC
UKMR15_RS13785
3150894
3151697
-
Genic
-217
NZ_LR595896.1
3151135
3151147
CCCCCG
12
+
2
CCGCCC
UKMR15_RS13785
3150894
3151697
-
Genic
-241
NZ_LR595896.1
3151390
3151405
AGCGCG
15
+
2
GCGCGA
UKMR15_RS13785
3150894
3151697
-
Genic
-496
NZ_LR595896.1
3151621
3151633
AGGGCG
12
+
2
GGGCGA
UKMR15_RS13785
3150894
3151697
-
Genic
-727
NZ_LR595896.1
3153491
3153503
AACGCG
12
-
2
CGTTCG
UKMR15_RS13795
3153202
3153840
-
Genic
-289
NZ_LR595896.1
3154217
3154229
ACGCGG
12
+
2
CGCGGA
UKMR15_RS13800
3154168
3154470
+
Genic
-49
NZ_LR595896.1
3154338
3154351
ACCACG
13
-
2
GTGGTC
UKMR15_RS13800
3154168
3154470
+
Genic
-170
NZ_LR595896.1
3154427
3154439
ACGCCG
12
-
2
CGGCGT
UKMR15_RS13800
3154168
3154470
+
Genic
-259
NZ_LR595896.1
3154998
3155010
AAGGG
12
-
2
CCTTC
UKMR15_RS13805
3154594
3154983
+
Intergenic
-404