Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 4751 to 4775 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3155536
3155550
CCGG
14
+
3
GCCG
UKMR15_RS13815
3155590
3156042
-
Intergenic
40
NZ_LR595896.1
3155969
3155984
ATCGCG
15
+
2
CGATCG
UKMR15_RS13815
3155590
3156042
-
Genic
-379
NZ_LR595896.1
3159642
3159654
ACG
12
-
4
CGT
UKMR15_RS13845
3159079
3160326
-
Genic
-563
NZ_LR595896.1
3161107
3161119
ACCGTG
12
-
2
GTCACG
ydfG
3160778
3161524
+
Genic
-329
NZ_LR595896.1
3161146
3161159
CCGCGG
13
+
2
CGCGGC
ydfG
3160778
3161524
+
Genic
-368
NZ_LR595896.1
3161191
3161203
ACCCGT
12
+
2
TACCCG
ydfG
3160778
3161524
+
Genic
-413
NZ_LR595896.1
3161554
3161566
CCGG
12
+
3
CGGC
ydfG
3160778
3161524
+
Intergenic
-776
NZ_LR595896.1
3162667
3162679
AATCG
12
+
2
TCGAA
tolQ
3162292
3162969
+
Genic
-375
NZ_LR595896.1
3163727
3163739
CCGCGG
12
+
2
GGCCGC
tolA
3163426
3164451
+
Genic
-301
NZ_LR595896.1
3164055
3164067
AAGGCG
12
+
2
GCGAAG
tolA
3163426
3164451
+
Genic
-629
NZ_LR595896.1
3164154
3164169
ACGGGC
15
+
2
GGCACG
tolA
3163426
3164451
+
Genic
-728
NZ_LR595896.1
3164420
3164432
AATCGT
12
-
2
GATTAC
tolA
3163426
3164451
+
Genic
-994
NZ_LR595896.1
3165508
3165520
CCGGCG
12
+
2
GCGCCG
tolB
3164548
3165849
+
Genic
-960
NZ_LR595896.1
3168590
3168607
ACGGC
17
+
3
CGGCA
galU
3168869
3169753
+
Intergenic
262
NZ_LR595896.1
3169191
3169203
AGCCCG
12
-
2
GCTCGG
galU
3168869
3169753
+
Genic
-322
NZ_LR595896.1
3170246
3170258
AGCCCG
12
+
2
CGAGCC
UKMR15_RS13910
3170008
3170943
-
Genic
-238
NZ_LR595896.1
3171543
3171555
ACGTCG
12
+
2
CGTCGA
UKMR15_RS13915
3171047
3171598
-
Genic
-496
NZ_LR595896.1
3171788
3171800
CCGGCG
12
+
2
GCCGGC
kdsA
3171595
3172440
-
Genic
-193
NZ_LR595896.1
3172058
3172070
ATCGCG
12
+
2
TCGCGA
kdsA
3171595
3172440
-
Genic
-463
NZ_LR595896.1
3172724
3172736
ACGTCG
12
+
2
CGACGT
UKMR15_RS13925
3172525
3173610
-
Genic
-199
NZ_LR595896.1
3172927
3172939
ACGGCG
12
-
2
TCGCCG
UKMR15_RS13925
3172525
3173610
-
Genic
-402
NZ_LR595896.1
3173069
3173081
CCG
12
-
4
CGG
UKMR15_RS13925
3172525
3173610
-
Genic
-544
NZ_LR595896.1
3173077
3173089
CCCGCG
12
-
2
GCGGGC
UKMR15_RS13925
3172525
3173610
-
Genic
-552
NZ_LR595896.1
3173620
3173633
CCCCGG
13
+
2
CCCCGG
UKMR15_RS13925
3172525
3173610
-
Intergenic
-1095
NZ_LR595896.1
3174088
3174102
AGCCGG
14
-
2
CTCCGG
UKMR15_RS13930
3173684
3174628
-
Genic
-404