Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 4776 to 4800 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3174107
3174119
ACGAGC
12
+
2
ACGAGC
UKMR15_RS13930
3173684
3174628
-
Genic
-423
NZ_LR595896.1
3174133
3174145
CCGCG
12
-
2
GCGCG
UKMR15_RS13930
3173684
3174628
-
Genic
-449
NZ_LR595896.1
3174220
3174232
CCCGCG
12
+
2
GCCCGC
UKMR15_RS13930
3173684
3174628
-
Genic
-536
NZ_LR595896.1
3175848
3175860
ATCGGC
12
+
2
TCGGCA
UKMR15_RS13940
3175163
3176359
-
Genic
-685
NZ_LR595896.1
3176099
3176111
CG
12
+
6
GC
UKMR15_RS13940
3175163
3176359
-
Genic
-936
NZ_LR595896.1
3176340
3176353
ACG
13
+
4
CGA
UKMR15_RS13940
3175163
3176359
-
Genic
-1177
NZ_LR595896.1
3176764
3176776
AGCGCG
12
+
2
AGCGCG
UKMR15_RS13945
3176392
3177666
-
Genic
-372
NZ_LR595896.1
3177100
3177113
AGCATC
13
+
2
ATCAGC
UKMR15_RS13945
3176392
3177666
-
Genic
-708
NZ_LR595896.1
3177785
3177798
ACGGCT
13
-
2
AGCCGT
UKMR15_RS13950
3177727
3179967
-
Genic
-58
NZ_LR595896.1
3179180
3179192
ATCCCG
12
-
2
GATCGG
UKMR15_RS13950
3177727
3179967
-
Genic
-1453
NZ_LR595896.1
3179291
3179303
ACGAGC
12
+
2
GCACGA
UKMR15_RS13950
3177727
3179967
-
Genic
-1564
NZ_LR595896.1
3179609
3179621
AAGCCG
12
-
2
GCTTCG
UKMR15_RS13950
3177727
3179967
-
Genic
-1882
NZ_LR595896.1
3180015
3180027
AGCCGC
12
+
2
AGCCGC
UKMR15_RS13955
3180009
3180443
-
Genic
-6
NZ_LR595896.1
3181045
3181057
ATCGC
12
-
2
CGATG
UKMR15_RS13960
3180440
3181708
-
Genic
-605
NZ_LR595896.1
3181314
3181326
CCGGCG
12
+
2
CCGGCG
UKMR15_RS13960
3180440
3181708
-
Genic
-874
NZ_LR595896.1
3181340
3181354
CCGCG
14
-
2
GCGCG
UKMR15_RS13960
3180440
3181708
-
Genic
-900
NZ_LR595896.1
3182111
3182123
ACGCCG
12
-
2
CGGCGT
UKMR15_RS13965
3181705
3182772
-
Genic
-406
NZ_LR595896.1
3183054
3183066
ATCCGC
12
+
2
ATCCGC
UKMR15_RS13970
3183007
3183936
-
Genic
-47
NZ_LR595896.1
3184198
3184210
AATTCC
12
+
2
CCAATT
UKMR15_RS13975
3184161
3184556
+
Genic
-37
NZ_LR595896.1
3185644
3185659
CCG
15
-
5
GCG
UKMR15_RS13985
3185752
3186963
+
Intergenic
93
NZ_LR595896.1
3186578
3186590
AGCGCG
12
+
2
GCGCGA
UKMR15_RS13985
3185752
3186963
+
Genic
-826
NZ_LR595896.1
3186862
3186874
ACG
12
-
4
TCG
UKMR15_RS13985
3185752
3186963
+
Genic
-1110
NZ_LR595896.1
3186915
3186929
ACCGGT
14
+
2
GGTACC
UKMR15_RS13985
3185752
3186963
+
Genic
-1163
NZ_LR595896.1
3189241
3189253
CCGCGG
12
+
2
GCCGCG
UKMR15_RS13995
3188638
3189330
-
Genic
-603
NZ_LR595896.1
3189273
3189286
CCGCG
13
-
2
GCGCG
UKMR15_RS13995
3188638
3189330
-
Genic
-635