Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 4701 to 4725 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3122696
3122710
ACGCG
14
+
2
CGCGA
UKMR15_RS13655
3120559
3122829
-
Genic
-2137
NZ_LR595896.1
3124087
3124099
ACCGGC
12
+
2
CCGGCA
UKMR15_RS13665
3123909
3124691
-
Genic
-178
NZ_LR595896.1
3124638
3124650
CCGCGG
12
+
2
GCGGCC
UKMR15_RS13665
3123909
3124691
-
Genic
-729
NZ_LR595896.1
3125752
3125765
CCGCG
13
+
2
CGCGC
xdhB
3125089
3127452
-
Genic
-663
NZ_LR595896.1
3127052
3127067
CCGCG
15
-
3
GCGCG
xdhB
3125089
3127452
-
Genic
-1963
NZ_LR595896.1
3127085
3127097
ACG
12
+
4
CGA
xdhB
3125089
3127452
-
Genic
-1996
NZ_LR595896.1
3127791
3127804
AACGCG
13
+
2
CGAACG
xdhA
3127481
3128998
-
Genic
-310
NZ_LR595896.1
3128176
3128188
CCCGCG
12
+
2
CGCGCC
xdhA
3127481
3128998
-
Genic
-695
NZ_LR595896.1
3128604
3128616
ACGGGC
12
-
2
CGTGCC
xdhA
3127481
3128998
-
Genic
-1123
NZ_LR595896.1
3128631
3128643
ACATCG
12
+
2
ACATCG
xdhA
3127481
3128998
-
Genic
-1150
NZ_LR595896.1
3129299
3129311
ACGGG
12
-
2
CCGTC
UKMR15_RS13685
3129278
3130501
+
Genic
-21
NZ_LR595896.1
3129356
3129368
AACGTG
12
-
2
CGTTCA
UKMR15_RS13685
3129278
3130501
+
Genic
-78
NZ_LR595896.1
3129591
3129607
AACGCG
16
-
2
CGCGTT
UKMR15_RS13685
3129278
3130501
+
Genic
-313
NZ_LR595896.1
3129954
3129968
AGGCCG
14
-
2
CGGCCT
UKMR15_RS13685
3129278
3130501
+
Genic
-676
NZ_LR595896.1
3129969
3129981
AGCCG
12
-
2
GCTCG
UKMR15_RS13685
3129278
3130501
+
Genic
-691
NZ_LR595896.1
3130145
3130157
AACGCG
12
-
2
CGTTCG
UKMR15_RS13685
3129278
3130501
+
Genic
-867
NZ_LR595896.1
3130228
3130241
AAGCCG
13
-
2
GGCTTC
UKMR15_RS13685
3129278
3130501
+
Genic
-950
NZ_LR595896.1
3130297
3130310
CCGCG
13
-
2
CGCGG
UKMR15_RS13685
3129278
3130501
+
Genic
-1019
NZ_LR595896.1
3130419
3130433
CCG
14
-
4
GGC
UKMR15_RS13685
3129278
3130501
+
Genic
-1141
NZ_LR595896.1
3130549
3130562
AAGCG
13
+
2
GCGAA
UKMR15_RS13690
3130442
3130888
-
Genic
-107
NZ_LR595896.1
3131513
3131525
ATCGGC
12
-
2
GCCGAT
UKMR15_RS13695
3131016
3131906
-
Genic
-497
NZ_LR595896.1
3132537
3132549
AGCGCG
12
-
2
CGCTCG
UKMR15_RS13700
3132048
3132995
+
Genic
-489
NZ_LR595896.1
3133678
3133690
ACG
12
+
4
CGA
UKMR15_RS13705
3133020
3134234
-
Genic
-658
NZ_LR595896.1
3134835
3134847
CCGG
12
+
3
GCCG
UKMR15_RS13710
3134256
3134570
+
Intergenic
-579
NZ_LR595896.1
3135834
3135846
ACCGGC
12
+
2
CCGGCA
UKMR15_RS13715
3135132
3136112
+
Genic
-702