Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 9476 to 9500 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2329790
2329803
AGCGCG
13
-
2
GCGCTC
UKMR15_RS26915
2329701
2331152
+
Genic
-89
NZ_LR595897.1
2332284
2332297
ACGCTG
13
+
2
GACGCT
acnA
2331200
2333917
+
Genic
-1084
NZ_LR595897.1
2333198
2333210
CG
12
+
6
GC
acnA
2331200
2333917
+
Genic
-1998
NZ_LR595897.1
2334793
2334805
AGAGGC
12
-
2
CTGCCT
UKMR15_RS26925
2334164
2336890
-
Genic
-629
NZ_LR595897.1
2335975
2335988
ACGCCC
13
+
2
CACGCC
UKMR15_RS26925
2334164
2336890
-
Genic
-1811
NZ_LR595897.1
2336801
2336813
CCCGCG
12
+
2
CCGCGC
UKMR15_RS26925
2334164
2336890
-
Genic
-2637
NZ_LR595897.1
2337212
2337224
AAACGG
12
+
2
CGGAAA
UKMR15_RS26930
2336991
2338655
-
Genic
-221
NZ_LR595897.1
2337410
2337422
AACCTG
12
-
2
GTTCAG
UKMR15_RS26930
2336991
2338655
-
Genic
-419
NZ_LR595897.1
2341125
2341137
CCGGCG
12
+
2
CGCCGG
UKMR15_RS26945
2339959
2342043
-
Genic
-1166
NZ_LR595897.1
2343285
2343297
CCG
12
+
4
CGC
UKMR15_RS26960
2343215
2344822
-
Genic
-70
NZ_LR595897.1
2343534
2343546
ACCGTC
12
+
2
CCGTCA
UKMR15_RS26960
2343215
2344822
-
Genic
-319
NZ_LR595897.1
2344130
2344142
ATCCCG
12
-
2
GGATCG
UKMR15_RS26960
2343215
2344822
-
Genic
-915
NZ_LR595897.1
2347260
2347273
AGAGGG
13
-
2
CTCTCC
UKMR15_RS26975
2347237
2348985
+
Genic
-23
NZ_LR595897.1
2347303
2347316
AGCGCG
13
-
2
CGCTCG
UKMR15_RS26975
2347237
2348985
+
Genic
-66
NZ_LR595897.1
2347870
2347884
AGCGCG
14
-
2
CGCTCG
UKMR15_RS26975
2347237
2348985
+
Genic
-633
NZ_LR595897.1
2348554
2348567
AACGGC
13
+
2
ACGGCA
UKMR15_RS26975
2347237
2348985
+
Genic
-1317
NZ_LR595897.1
2349283
2349296
AACGCG
13
+
2
CGCGAA
UKMR15_RS26980
2349080
2349919
-
Genic
-203
NZ_LR595897.1
2349533
2349545
ACG
12
+
4
ACG
UKMR15_RS26980
2349080
2349919
-
Genic
-453
NZ_LR595897.1
2350165
2350177
CCCGCG
12
+
2
CGCGCC
UKMR15_RS26985
2349950
2351209
-
Genic
-215
NZ_LR595897.1
2350551
2350566
AGCGCG
15
+
2
CGAGCG
UKMR15_RS26985
2349950
2351209
-
Genic
-601
NZ_LR595897.1
2350626
2350638
ATCCCG
12
-
2
GATCGG
UKMR15_RS26985
2349950
2351209
-
Genic
-676
NZ_LR595897.1
2352324
2352337
CCGCG
13
-
2
GCGCG
UKMR15_RS26990
2351310
2352356
-
Genic
-1014
NZ_LR595897.1
2353080
2353092
AGCGCG
12
+
2
GCGCGA
UKMR15_RS26995
2352431
2353531
-
Genic
-649
NZ_LR595897.1
2353441
2353453
AGATCC
12
+
2
ATCCAG
UKMR15_RS26995
2352431
2353531
-
Genic
-1010
NZ_LR595897.1
2354388
2354400
ACGGGC
12
-
2
GCCCGT
UKMR15_RS27000
2353640
2355169
+
Genic
-748