Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 9526 to 9550 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2376314
2376326
AACAGG
12
+
2
CAGGAA
UKMR15_RS27100
2375490
2377364
-
Genic
-824
NZ_LR595897.1
2376388
2376400
CCGG
12
+
3
GCCG
UKMR15_RS27100
2375490
2377364
-
Genic
-898
NZ_LR595897.1
2376511
2376523
AGCGCG
12
+
2
GCGCGA
UKMR15_RS27100
2375490
2377364
-
Genic
-1021
NZ_LR595897.1
2377438
2377450
CCGCG
12
+
2
CGCGC
UKMR15_RS27105
2377459
2377905
-
Intergenic
9
NZ_LR595897.1
2379547
2379560
CCCGCG
13
+
2
CCGCGC
UKMR15_RS27115
2378364
2379587
-
Genic
-1183
NZ_LR595897.1
2379889
2379901
AGCGGC
12
-
2
CGCTGC
tsaD
2379727
2380767
+
Genic
-162
NZ_LR595897.1
2380018
2380030
AACGCG
12
-
2
TCGCGT
tsaD
2379727
2380767
+
Genic
-291
NZ_LR595897.1
2380242
2380254
AGGCCG
12
-
2
CTCGGC
tsaD
2379727
2380767
+
Genic
-515
NZ_LR595897.1
2380349
2380362
AAGCTG
13
-
2
CTTCAG
tsaD
2379727
2380767
+
Genic
-622
NZ_LR595897.1
2382193
2382206
ACGGCG
13
-
2
GCCGTC
dxs
2382119
2384023
-
Genic
-74
NZ_LR595897.1
2383491
2383504
AACGAC
13
-
2
TGTCGT
dxs
2382119
2384023
-
Genic
-1372
NZ_LR595897.1
2384153
2384165
CG
12
+
6
GC
UKMR15_RS27135
2384107
2384991
-
Genic
-46
NZ_LR595897.1
2384553
2384566
AGCGCG
13
+
2
CGCGAG
UKMR15_RS27135
2384107
2384991
-
Genic
-446
NZ_LR595897.1
2385112
2385125
CCGCG
13
+
2
GCGCC
UKMR15_RS27140
2384988
2385281
-
Genic
-124
NZ_LR595897.1
2385247
2385259
ACGCGC
12
+
2
ACGCGC
UKMR15_RS27140
2384988
2385281
-
Genic
-259
NZ_LR595897.1
2385795
2385807
ACCGCC
12
+
2
CCGCCA
UKMR15_RS27145
2385551
2386657
+
Genic
-244
NZ_LR595897.1
2386785
2386797
AAAAAC
12
-
2
GTTTTT
UKMR15_RS27150
2386808
2388271
+
Intergenic
11
NZ_LR595897.1
2387260
2387272
AACGCG
12
+
2
GCGAAC
UKMR15_RS27150
2386808
2388271
+
Genic
-452
NZ_LR595897.1
2388150
2388162
AAGCGG
12
+
2
GCGGAA
UKMR15_RS27150
2386808
2388271
+
Genic
-1342
NZ_LR595897.1
2391522
2391535
AATCTG
13
+
2
GAATCT
UKMR15_RS27165
2390762
2392711
+
Genic
-760
NZ_LR595897.1
2394479
2394491
ACGCGG
12
+
2
CGGACG
UKMR15_RS27170
2392975
2394357
-
Intergenic
-1504
NZ_LR595897.1
2394698
2394711
ACGCCG
13
+
2
CGCCGA
polA
2394676
2397447
-
Genic
-22
NZ_LR595897.1
2395468
2395480
ACCGCC
12
+
2
ACCGCC
polA
2394676
2397447
-
Genic
-792
NZ_LR595897.1
2395936
2395948
AGCTGC
12
+
2
TGCAGC
polA
2394676
2397447
-
Genic
-1260
NZ_LR595897.1
2398759
2398771
CCCGCG
12
+
2
CCCGCG
UKMR15_RS27185
2398616
2398900
+
Genic
-143