Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 9551 to 9575 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2398993
2399005
CCG
12
-
4
CGG
UKMR15_RS27185
2398616
2398900
+
Intergenic
-377
NZ_LR595897.1
2399742
2399754
CCG
12
-
4
GCG
UKMR15_RS27195
2400487
2400750
-
Intergenic
733
NZ_LR595897.1
2400358
2400370
AAACGT
12
-
2
TACGTT
UKMR15_RS27195
2400487
2400750
-
Intergenic
117
NZ_LR595897.1
2401308
2401321
AGCCAT
13
+
2
AGCCAT
UKMR15_RS27200
2400929
2402155
-
Genic
-379
NZ_LR595897.1
2404838
2404850
CCG
12
-
4
GCG
UKMR15_RS27220
2404144
2405670
-
Genic
-694
NZ_LR595897.1
2405220
2405233
ACCGCG
13
-
2
GCGGTC
UKMR15_RS27220
2404144
2405670
-
Genic
-1076
NZ_LR595897.1
2406542
2406555
ACGGGC
13
-
2
GTGCCC
UKMR15_RS27230
2406318
2407313
+
Genic
-224
NZ_LR595897.1
2407457
2407469
AGCGGC
12
-
2
CGCTGC
UKMR15_RS27235
2407304
2408116
+
Genic
-153
NZ_LR595897.1
2409044
2409056
ACGCCG
12
+
2
CCGACG
UKMR15_RS27245
2408612
2409064
+
Genic
-432
NZ_LR595897.1
2409863
2409875
AACAGG
12
+
2
AACAGG
UKMR15_RS27255
2409734
2409892
-
Genic
-129
NZ_LR595897.1
2410650
2410664
ACGCGC
14
-
2
CGTGCG
UKMR15_RS27260
2409989
2411137
-
Genic
-661
NZ_LR595897.1
2415869
2415881
CCG
12
+
4
GCC
UKMR15_RS27285
2415300
2416148
-
Genic
-569
NZ_LR595897.1
2416032
2416045
CCGCG
13
+
2
CGCGC
UKMR15_RS27285
2415300
2416148
-
Genic
-732
NZ_LR595897.1
2416323
2416335
AGCGC
12
+
2
GCAGC
UKMR15_RS27285
2415300
2416148
-
Intergenic
-1023
NZ_LR595897.1
2417240
2417252
AACGGC
12
+
2
CGGCAA
UKMR15_RS27295
2418320
2418703
-
Intergenic
1068
NZ_LR595897.1
2417712
2417725
CCGCGG
13
+
2
GCGGCC
UKMR15_RS27295
2418320
2418703
-
Intergenic
595
NZ_LR595897.1
2418570
2418582
ACCGTG
12
-
2
CGGTCA
UKMR15_RS27295
2418320
2418703
-
Genic
-250
NZ_LR595897.1
2418784
2418797
AAATGG
13
-
2
TCCATT
UKMR15_RS27300
2418801
2419676
+
Intergenic
4
NZ_LR595897.1
2419339
2419351
AGCGGC
12
-
2
GCCGCT
UKMR15_RS27300
2418801
2419676
+
Genic
-538
NZ_LR595897.1
2419789
2419801
CCG
12
+
4
CGC
UKMR15_RS27305
2419743
2420663
+
Genic
-46
NZ_LR595897.1
2420426
2420438
ACGCCG
12
-
2
GTCGGC
UKMR15_RS27305
2419743
2420663
+
Genic
-683
NZ_LR595897.1
2420469
2420481
CCCGCG
12
+
2
CCGCGC
UKMR15_RS27305
2419743
2420663
+
Genic
-726
NZ_LR595897.1
2421416
2421428
AGCGCG
12
-
2
TCGCGC
UKMR15_RS27310
2420756
2421535
+
Genic
-660
NZ_LR595897.1
2421833
2421845
AGGCCG
12
-
2
CTCGGC
UKMR15_RS27315
2421621
2422961
+
Genic
-212
NZ_LR595897.1
2422173
2422185
AAGCTG
12
+
2
AGCTGA
UKMR15_RS27315
2421621
2422961
+
Genic
-552