Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 9601 to 9625 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2443330
2443342
ACGAGC
12
+
2
CGAGCA
UKMR15_RS27425
2443176
2443541
-
Genic
-154
NZ_LR595897.1
2444130
2444142
AGCTC
12
+
2
GCTCA
UKMR15_RS27435
2444133
2444786
-
Genic
3
NZ_LR595897.1
2445967
2445979
AGCGCG
12
-
2
TCGCGC
UKMR15_RS27445
2445736
2446443
-
Genic
-231
NZ_LR595897.1
2446570
2446582
CCGCGG
12
+
2
CGGCCG
UKMR15_RS27450
2446434
2446853
-
Genic
-136
NZ_LR595897.1
2447993
2448005
ACAGCC
12
+
2
GCCACA
UKMR15_RS27455
2447584
2448492
-
Genic
-409
NZ_LR595897.1
2448670
2448683
AGCGCG
13
-
2
CGCTCG
UKMR15_RS27460
2448510
2448716
+
Genic
-160
NZ_LR595897.1
2449149
2449161
AACGCG
12
-
2
CGTTCG
UKMR15_RS27465
2448996
2449337
+
Genic
-153
NZ_LR595897.1
2449502
2449516
ACGATG
14
+
2
CGATGA
UKMR15_RS27470
2449400
2450167
+
Genic
-102
NZ_LR595897.1
2450327
2450339
CCCGG
12
-
2
GCCGG
UKMR15_RS27475
2450456
2451622
-
Intergenic
117
NZ_LR595897.1
2451092
2451104
ACGCGC
12
+
2
ACGCGC
UKMR15_RS27475
2450456
2451622
-
Genic
-636
NZ_LR595897.1
2452350
2452363
CG
13
+
6
CG
UKMR15_RS27480
2451622
2452806
-
Genic
-728
NZ_LR595897.1
2452890
2452902
AACAGC
12
+
2
AACAGC
UKMR15_RS27485
2452803
2454278
-
Genic
-87
NZ_LR595897.1
2452991
2453004
AACCGC
13
+
2
CCGCAA
UKMR15_RS27485
2452803
2454278
-
Genic
-188
NZ_LR595897.1
2453364
2453378
ACGCGC
14
+
2
CGCACG
UKMR15_RS27485
2452803
2454278
-
Genic
-561
NZ_LR595897.1
2453534
2453548
AACGCG
14
+
2
CGCGAA
UKMR15_RS27485
2452803
2454278
-
Genic
-731
NZ_LR595897.1
2454100
2454112
ATCGCG
12
+
2
TCGCGA
UKMR15_RS27485
2452803
2454278
-
Genic
-1297
NZ_LR595897.1
2454829
2454845
ATCGCG
16
+
2
ATCGCG
UKMR15_RS27490
2454290
2455429
-
Genic
-539
NZ_LR595897.1
2455634
2455647
ACC
13
+
4
CCA
UKMR15_RS27495
2455473
2456420
-
Genic
-161
NZ_LR595897.1
2455777
2455790
ACGGCG
13
+
2
CGACGG
UKMR15_RS27495
2455473
2456420
-
Genic
-304
NZ_LR595897.1
2455859
2455871
CCCGCG
12
+
2
CGCGCC
UKMR15_RS27495
2455473
2456420
-
Genic
-386
NZ_LR595897.1
2455960
2455972
ACGCCG
12
+
2
CGCCGA
UKMR15_RS27495
2455473
2456420
-
Genic
-487
NZ_LR595897.1
2456135
2456148
CCGCG
13
-
2
GCGCG
UKMR15_RS27495
2455473
2456420
-
Genic
-662
NZ_LR595897.1
2456244
2456256
AGCGCG
12
+
2
AGCGCG
UKMR15_RS27495
2455473
2456420
-
Genic
-771
NZ_LR595897.1
2456340
2456352
AGCGGC
12
-
2
CGCTGC
UKMR15_RS27495
2455473
2456420
-
Genic
-867
NZ_LR595897.1
2457727
2457739
AGGCGG
12
-
2
CTCCGC
UKMR15_RS27500
2456450
2458669
-
Genic
-1277