Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 9651 to 9675 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2471447
2471459
ACGCGC
12
+
2
CGCGCA
UKMR15_RS27555
2471126
2472394
-
Genic
-321
NZ_LR595897.1
2471817
2471829
CCGCG
12
+
2
GCCGC
UKMR15_RS27555
2471126
2472394
-
Genic
-691
NZ_LR595897.1
2472115
2472127
AGATCG
12
+
2
ATCGAG
UKMR15_RS27555
2471126
2472394
-
Genic
-989
NZ_LR595897.1
2472833
2472845
ACGCG
12
+
2
CGACG
UKMR15_RS27560
2472391
2472930
-
Genic
-442
NZ_LR595897.1
2473596
2473608
ATCGCG
12
+
2
TCGCGA
UKMR15_RS27570
2473532
2473885
-
Genic
-64
NZ_LR595897.1
2474071
2474083
CCGCG
12
-
2
GCGGC
UKMR15_RS27575
2474247
2476121
+
Intergenic
164
NZ_LR595897.1
2474555
2474567
CG
12
+
6
CG
UKMR15_RS27575
2474247
2476121
+
Genic
-308
NZ_LR595897.1
2474939
2474952
CCGGCG
13
+
2
CCGGCG
UKMR15_RS27575
2474247
2476121
+
Genic
-692
NZ_LR595897.1
2475072
2475084
AGCGCG
12
+
2
GCGCGA
UKMR15_RS27575
2474247
2476121
+
Genic
-825
NZ_LR595897.1
2475096
2475108
CCCGCG
12
+
2
CCGCGC
UKMR15_RS27575
2474247
2476121
+
Genic
-849
NZ_LR595897.1
2475162
2475174
ACGGCG
12
+
2
ACGGCG
UKMR15_RS27575
2474247
2476121
+
Genic
-915
NZ_LR595897.1
2476382
2476394
ACGCGG
12
+
2
GACGCG
UKMR15_RS27575
2474247
2476121
+
Intergenic
-2135
NZ_LR595897.1
2476487
2476499
AGGCG
12
-
2
CCTCG
UKMR15_RS27580
2476679
2476912
-
Intergenic
180
NZ_LR595897.1
2476820
2476832
CCGCGG
12
+
2
GCCGCG
UKMR15_RS27580
2476679
2476912
-
Genic
-141
NZ_LR595897.1
2477081
2477097
ACGTCG
16
+
2
GACGTC
UKMR15_RS27585
2476911
2477291
+
Genic
-170
NZ_LR595897.1
2477364
2477376
ATCGCG
12
+
2
TCGCGA
UKMR15_RS27590
2477340
2477924
+
Genic
-24
NZ_LR595897.1
2478414
2478426
ACGCGT
12
+
2
CGCGTA
UKMR15_RS27595
2478152
2479210
+
Genic
-262
NZ_LR595897.1
2478797
2478809
ACCGCG
12
-
2
TCGCGG
UKMR15_RS27595
2478152
2479210
+
Genic
-645
NZ_LR595897.1
2480283
2480295
ACGGCT
12
-
2
GCCGTA
UKMR15_RS27605
2480026
2482122
-
Genic
-257
NZ_LR595897.1
2480648
2480660
AAGGAG
12
-
2
CCTTCT
UKMR15_RS27605
2480026
2482122
-
Genic
-622
NZ_LR595897.1
2482132
2482145
ACACC
13
-
2
GGTGT
UKMR15_RS27605
2480026
2482122
-
Intergenic
-2106
NZ_LR595897.1
2482901
2482913
ACGCCG
12
-
2
TCGGCG
UKMR15_RS27610
2482589
2483794
+
Genic
-312
NZ_LR595897.1
2483630
2483642
CCGCG
12
-
2
GCGGC
UKMR15_RS27610
2482589
2483794
+
Genic
-1041
NZ_LR595897.1
2485099
2485112
AGCGGC
13
+
2
GCGGCA
UKMR15_RS27615
2484462
2485778
-
Genic
-637
NZ_LR595897.1
2486548
2486561
AAGACG
13
-
2
CTTCGT
UKMR15_RS27620
2485766
2486563
-
Genic
-782