Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 9701 to 9725 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2507375
2507388
ACGCG
13
-
2
GCGTC
UKMR15_RS27710
2506741
2507463
-
Genic
-634
NZ_LR595897.1
2507822
2507834
AGCGCC
12
+
2
CAGCGC
UKMR15_RS27715
2507822
2508850
-
Genic
0
NZ_LR595897.1
2507911
2507924
CCGCGG
13
+
2
CGCGGC
UKMR15_RS27715
2507822
2508850
-
Genic
-89
NZ_LR595897.1
2508413
2508426
CCCGCG
13
-
2
GGCGCG
UKMR15_RS27715
2507822
2508850
-
Genic
-591
NZ_LR595897.1
2508422
2508435
CCG
13
-
4
GCG
UKMR15_RS27715
2507822
2508850
-
Genic
-600
NZ_LR595897.1
2508556
2508569
CCCGCG
13
+
2
CGCGCC
UKMR15_RS27715
2507822
2508850
-
Genic
-734
NZ_LR595897.1
2509064
2509076
ACATCG
12
-
2
ATGTCG
UKMR15_RS27720
2508857
2511451
-
Genic
-207
NZ_LR595897.1
2509131
2509143
ATCGCG
12
+
2
CGATCG
UKMR15_RS27720
2508857
2511451
-
Genic
-274
NZ_LR595897.1
2509316
2509328
ACGTCG
12
+
2
TCGACG
UKMR15_RS27720
2508857
2511451
-
Genic
-459
NZ_LR595897.1
2509473
2509487
ACG
14
+
4
CGA
UKMR15_RS27720
2508857
2511451
-
Genic
-616
NZ_LR595897.1
2509611
2509625
AGCTCG
14
+
2
GCTCGA
UKMR15_RS27720
2508857
2511451
-
Genic
-754
NZ_LR595897.1
2510234
2510247
ACGCG
13
-
2
CGCGT
UKMR15_RS27720
2508857
2511451
-
Genic
-1377
NZ_LR595897.1
2510883
2510895
CCCGCG
12
+
2
CCGCGC
UKMR15_RS27720
2508857
2511451
-
Genic
-2026
NZ_LR595897.1
2510975
2510988
CCGCG
13
+
2
CGCGC
UKMR15_RS27720
2508857
2511451
-
Genic
-2118
NZ_LR595897.1
2511376
2511388
ACGCAG
12
-
2
CTGCGT
UKMR15_RS27720
2508857
2511451
-
Genic
-2519
NZ_LR595897.1
2511566
2511578
ACCGGC
12
+
2
CCGGCA
UKMR15_RS27725
2511448
2512182
-
Genic
-118
NZ_LR595897.1
2511681
2511696
CCGCG
15
-
3
GCGCG
UKMR15_RS27725
2511448
2512182
-
Genic
-233
NZ_LR595897.1
2512687
2512699
ACGCCG
12
+
2
CGACGC
UKMR15_RS27730
2512163
2514217
-
Genic
-524
NZ_LR595897.1
2513340
2513352
CCCGCG
12
+
2
CGCCCG
UKMR15_RS27730
2512163
2514217
-
Genic
-1177
NZ_LR595897.1
2513384
2513397
AACGCG
13
+
2
AACGCG
UKMR15_RS27730
2512163
2514217
-
Genic
-1221
NZ_LR595897.1
2513932
2513944
AGCGCG
12
-
2
CTCGCG
UKMR15_RS27730
2512163
2514217
-
Genic
-1769
NZ_LR595897.1
2514084
2514096
CCCGCG
12
+
2
CGCCCG
UKMR15_RS27730
2512163
2514217
-
Genic
-1921
NZ_LR595897.1
2514506
2514520
ACGAGC
14
+
2
GCACGA
UKMR15_RS27735
2514214
2514732
-
Genic
-292
NZ_LR595897.1
2514576
2514589
ACCGGC
13
+
2
CACCGG
UKMR15_RS27735
2514214
2514732
-
Genic
-362
NZ_LR595897.1
2515282
2515294
AACATC
12
-
2
GTTGAT
UKMR15_RS27740
2514767
2516443
-
Genic
-515